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    PnsL1 PsbP-like protein 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818532, updated on 18-Sep-2024

    Summary

    Official Symbol
    PnsL1
    Official Full Name
    PsbP-like protein 2
    Primary source
    TAIR:AT2G39470
    Locus tag
    AT2G39470
    See related
    Araport:AT2G39470
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12L6.13; F12L6_13; Photosynthetic NDH subcomplex L 1; PPL2; PsbP-like protein 2
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    Genomic context

    See PnsL1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Sequence:
    Chromosome: 2; NC_003071.7 (16476198..16477843)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Cation efflux family protein Neighboring gene ribosomal protein L23AA Neighboring gene P-glycoprotein 6 Neighboring gene ncRNA Neighboring gene F-box family protein

    Interactions

    General gene information

    NM_001036437.3
    NM_001084553.1
    NM_129505.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium ion binding  
    Process Evidence Code Pubs
    involved_in photosynthesis  

    General protein information

    Preferred Names
    PsbP-like protein 2
    NP_001031514.2
    • PsbP-like protein 2 (PPL2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast, oxygen evolving complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001078022.1
    • PsbP-like protein 2 (PPL2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast, oxygen evolving complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 90 Blast hits to 90 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    NP_565906.1
    • PsbP-like protein 2 (PPL2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbP (InterPro:IPR002683), Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich (InterPro:IPR016124), Mog1/PsbP, alpha/beta/alpha sandwich (InterPro:IPR016123); BEST Arabidopsis thaliana protein match is: PsbP-like protein 1 (TAIR:AT3G55330.1); Has 344 Blast hits to 344 proteins in 81 species: Archae - 0; Bacteria - 104; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      16476198..16477843
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129505.4NP_565906.1  PsbP-like protein 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565906.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A8MQY7, O80634, Q2V417, Q94BP9
      UniProtKB/TrEMBL
      A0A178VT67
      Conserved Domains (1) summary
      pfam01789
      Location:81235
      PsbP; PsbP
    2. NM_001036437.3NP_001031514.2  PsbP-like protein 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031514.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X5K3, A0A654F099
      Conserved Domains (1) summary
      pfam01789
      Location:73227
      PsbP; PsbP
    3. NM_001084553.1NP_001078022.1  PsbP-like protein 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078022.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80634
      Conserved Domains (1) summary
      pfam01789
      Location:73164
      PsbP; PsbP
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