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ARP8 actin-related protein 8 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835717, updated on 18-Sep-2024

Summary

Official Symbol
ARP8
Official Full Name
actin-related protein 8
Primary source
TAIR:AT5G56180
Locus tag
AT5G56180
See related
Araport:AT5G56180
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
actin-related protein 8; AT5G56185; ATARP8; MDA7.26
Summary
encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes.
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Genomic context

See ARP8 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Sequence:
Chromosome: 5; NC_003076.8 (22737325..22741100, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme 30 Neighboring gene Sec14p-like phosphatidylinositol transfer family protein Neighboring gene LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene C2H2 type zinc finger transcription factor family

General gene information

NM_125000.4
NM_203211.1

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in chloroplast  
located_in cytoplasm  
located_in nucleus PubMed 

General protein information

Preferred Names
actin-related protein 8
NP_568836.2
  • actin-related protein 8 (ARP8); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin-11 (TAIR:AT3G12110.1); Has 10755 Blast hits to 10746 proteins in 2376 species: Archae - 0; Bacteria - 6; Metazoa - 4699; Fungi - 2663; Plants - 1312; Viruses - 0; Other Eukaryotes - 2075 (source: NCBI BLink).
NP_974940.1
  • actin-related protein 8 (ARP8); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin 9 (TAIR:AT2G42090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    22737325..22741100 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001345181.1NP_001330467.1  actin-related protein 8 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BAX0
    Conserved Domains (1) summary
    cl17037
    Location:50330
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
  2. NM_125000.4NP_568836.2  actin-related protein 8 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568836.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q7PCC3, Q84WA6, Q8L8Z7, Q8LKQ9, Q9FKT0
    UniProtKB/TrEMBL
    A0A7G2FGL5
    Conserved Domains (2) summary
    pfam12937
    Location:4383
    F-box-like
    cl17037
    Location:136462
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
  3. NM_203211.1NP_974940.1  actin-related protein 8 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974940.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UIZ8
    Conserved Domains (2) summary
    pfam12937
    Location:4383
    F-box-like; F-box-like
    cl17037
    Location:182364
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
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