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POD1 POLLEN DEFECTIVE IN GUIDANCE-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843124, updated on 18-Sep-2024

Summary

Official Symbol
POD1
Official Full Name
POLLEN DEFECTIVE IN GUIDANCE-like protein
Primary source
TAIR:AT1G67960
Locus tag
AT1G67960
See related
Araport:AT1G67960
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
POLLEN DEFECTIVE IN GUIDANCE 1; T23K23.19; T23K23_19
Summary
POD1 is involved in pollen tube guidence and early embryo patterning.
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Genomic context

See POD1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Sequence:
Chromosome: 1; NC_003070.9 (25480652..25484396, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene non-intrinsic ABC protein 3 Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene ncRNA Neighboring gene heat shock transcription factor A8 Neighboring gene caffeoyl-CoA 3-O-methyltransferase

General gene information

NM_105466.3

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in endoplasmic reticulum PubMed 
located_in endoplasmic reticulum lumen PubMed 
located_in nucleus  

General protein information

Preferred Names
POLLEN DEFECTIVE IN GUIDANCE-like protein
NP_176963.2
  • CONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV receptor (InterPro:IPR008010); Has 447 Blast hits to 428 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 190; Fungi - 133; Plants - 49; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    25480652..25484396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105466.3NP_176963.2  POLLEN DEFECTIVE IN GUIDANCE-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176963.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4HVJ3, Q8VZM8, Q9C9W2
    UniProtKB/TrEMBL
    A0A178W5K7
    Conserved Domains (1) summary
    pfam05346
    Location:303611
    DUF747; Eukaryotic membrane protein family
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