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PGSIP4 plant glycogenin-like starch initiation protein 4 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841934, updated on 18-Sep-2024

Summary

Official Symbol
PGSIP4
Official Full Name
plant glycogenin-like starch initiation protein 4
Primary source
TAIR:AT1G54940
Locus tag
AT1G54940
See related
Araport:AT1G54940
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14C21.47; F14C21_47; Glucuronic Acid Substitution of Xylan 4; GUX4; plant glycogenin-like starch initiation protein 4
Summary
Encodes a xylan glucuronosyltransferase.
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Genomic context

See PGSIP4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (20481648..20484799)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene GRF zinc finger / Zinc knuckle protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA

General gene information

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in Golgi apparatus PubMed 

General protein information

Preferred Names
plant glycogenin-like starch initiation protein 4
NP_175891.1
  • plant glycogenin-like starch initiation protein 4 (PGSIP4); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 5 (TAIR:AT1G08990.1); Has 1335 Blast hits to 1329 proteins in 289 species: Archae - 0; Bacteria - 103; Metazoa - 257; Fungi - 309; Plants - 506; Viruses - 75; Other Eukaryotes - 85 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    20481648..20484799
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104367.2NP_175891.1  plant glycogenin-like starch initiation protein 4 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175891.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FZ37
    UniProtKB/TrEMBL
    A0A178W326, A0A384KQH5, W8PV93
    Conserved Domains (1) summary
    cd02537
    Location:271507
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
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