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CPK26 calcium-dependent protein kinase 26 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829980, updated on 18-Sep-2024

Summary

Official Symbol
CPK26
Official Full Name
calcium-dependent protein kinase 26
Primary source
TAIR:AT4G38230
Locus tag
AT4G38230
See related
Araport:AT4G38230
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA CALCIUM-DEPENDENT PROTEIN KINASE 26; ATCPK26; calcium-dependent protein kinase 26; F20D10.350; F20D10_350
Summary
member of Calcium Dependent Protein Kinase
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Genomic context

See CPK26 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Sequence:
Chromosome: 4; NC_003075.7 (17928677..17931511, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tubulin-tyrosine ligase Neighboring gene Peptidase M20/M25/M40 family protein Neighboring gene glycerol kinase Neighboring gene alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene ncRNA Neighboring gene transport/golgi organization-like protein (DUF833)

Interactions

General gene information

NM_001204020.2
NM_001342486.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calcium ion binding  
enables protein kinase activity  
Component Evidence Code Pubs
located_in plasma membrane PubMed 
located_in plasma membrane  

General protein information

Preferred Names
calcium-dependent protein kinase 26
NP_001190949.1
  • calcium-dependent protein kinase 26 (CPK26); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase family protein (TAIR:AT2G17290.1).
NP_001190950.1
  • calcium-dependent protein kinase 26 (CPK26); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase family protein (TAIR:AT2G17290.1).
NP_195536.2
  • calcium-dependent protein kinase 26 (CPK26); FUNCTIONS IN: calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase family protein (TAIR:AT2G17290.1); Has 94022 Blast hits to 87051 proteins in 3195 species: Archae - 49; Bacteria - 6802; Metazoa - 37554; Fungi - 14737; Plants - 17453; Viruses - 106; Other Eukaryotes - 17321 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17928677..17931511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119985.2NP_195536.2  calcium-dependent protein kinase 26 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195536.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SZM3
    Conserved Domains (3) summary
    PTZ00184
    Location:174316
    PTZ00184; calmodulin; Provisional
    cd00051
    Location:257317
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl21453
    Location:1137
    PKc_like; Protein Kinases, catalytic domain
  2. NM_001204021.1NP_001190950.1  calcium-dependent protein kinase 26 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190950.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q058J0, Q9SZM3
    UniProtKB/TrEMBL
    A0A178V0I0, A0A654FWM9
    Conserved Domains (2) summary
    COG5126
    Location:322460
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
    cd05117
    Location:24281
    STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases
  3. NM_001204020.2NP_001190949.1  calcium-dependent protein kinase 26 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190949.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y052, F4JTL3
    Conserved Domains (4) summary
    PTZ00184
    Location:348490
    PTZ00184; calmodulin; Provisional
    cd00051
    Location:431491
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cd05117
    Location:54311
    STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases
    pfam00069
    Location:54312
    Pkinase; Protein kinase domain
  4. NM_001342486.1NP_001328909.1  calcium-dependent protein kinase 26 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q058J0, Q9SZM3
    UniProtKB/TrEMBL
    A0A178V0I0, A0A654FWM9
    Conserved Domains (2) summary
    COG5126
    Location:322460
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
    cd05117
    Location:24281
    STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases
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