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Mannose-binding lectin superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841634, updated on 18-Sep-2024

Summary

Official Full Name
Mannose-binding lectin superfamily protein
Primary source
TAIR:AT1G52050
Locus tag
AT1G52050
See related
Araport:AT1G52050
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F5F19.11; F5F19_11
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Genomic context

Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (19354919..19356901, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene myrosinase-binding protein 1 Neighboring gene ncRNA Neighboring gene Mannose-binding lectin superfamily protein Neighboring gene Mannose-binding lectin superfamily protein

General gene information

NM_104086.3

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
is_active_in cellular_component  
located_in extracellular region  

General protein information

Preferred Names
Mannose-binding lectin superfamily protein
NP_175617.2
  • Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G52070.1); Has 1535 Blast hits to 688 proteins in 39 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1529; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    19354919..19356901 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104086.3NP_175617.2  Mannose-binding lectin superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175617.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IB94, Q9ZU20
    UniProtKB/TrEMBL
    A0A178WK32
    Conserved Domains (2) summary
    smart00915
    Location:177309
    Jacalin; Jacalin-like lectin domain
    pfam01419
    Location:34163
    Jacalin; Jacalin-like lectin domain
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