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    PSPC1 paraspeckle component 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705080, updated on 17-Aug-2024

    Summary

    Official Symbol
    PSPC1provided by VGNC
    Official Full Name
    paraspeckle component 1provided by VGNC
    Primary source
    VGNC:VGNC:76293
    See related
    Ensembl:ENSMMUG00000020262
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
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    Genomic context

    See PSPC1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (1219631..1325413)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (301334..407842, complement)

    Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene KRR1 small subunit processome component homolog Neighboring gene zinc finger MYM-type containing 2 Neighboring gene zinc finger MYM-type containing 5 Neighboring gene M-phase phosphoprotein 8 Neighboring gene protein CASC4-like

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding PubMed 
    Component Evidence Code Pubs
    located_in nucleus PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257902.1NP_001244831.1  paraspeckle component 1

      See identical proteins and their annotated locations for NP_001244831.1

      Status: PROVISIONAL

      Source sequence(s)
      JU335291
      UniProtKB/TrEMBL
      F6XYS7
      Related
      ENSMMUP00000036495.2, ENSMMUT00000043493.3
      Conserved Domains (3) summary
      cd12949
      Location:227320
      NOPS_PSPC1; NOPS domain, including C-terminal coiled-coil region, in paraspeckle protein component 1 (PSPC1) and similar proteins
      cd12586
      Location:81151
      RRM1_PSP1; RNA recognition motif 1 in vertebrate paraspeckle protein 1 (PSP1)
      cd12589
      Location:157236
      RRM2_PSP1; RNA recognition motif 2 in vertebrate paraspeckle protein 1 (PSP1 or PSPC1)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041770.1 Reference Mmul_10 Primary Assembly

      Range
      1219631..1325413
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028837134.1XP_028692967.1  paraspeckle component 1 isoform X1

      Conserved Domains (3) summary
      cd12946
      Location:227319
      NOPS_p54nrb_PSF_PSPC1; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSPC1 family proteins
      cd12586
      Location:81151
      RRM1_PSP1; RNA recognition motif 1 in vertebrate paraspeckle protein 1 (PSP1)
      cd12589
      Location:157236
      RRM2_PSP1; RNA recognition motif 2 in vertebrate paraspeckle protein 1 (PSP1 or PSPC1)
    2. XM_028837135.1XP_028692968.1  paraspeckle component 1 isoform X2

      Conserved Domains (3) summary
      cd12946
      Location:227319
      NOPS_p54nrb_PSF_PSPC1; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSPC1 family proteins
      cd12586
      Location:81151
      RRM1_PSP1; RNA recognition motif 1 in vertebrate paraspeckle protein 1 (PSP1)
      cd12589
      Location:157236
      RRM2_PSP1; RNA recognition motif 2 in vertebrate paraspeckle protein 1 (PSP1 or PSPC1)
    3. XM_015120676.2XP_014976162.2  paraspeckle component 1 isoform X4

      Conserved Domains (3) summary
      cd12946
      Location:227319
      NOPS_p54nrb_PSF_PSPC1; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSPC1 family proteins
      cd12586
      Location:81151
      RRM1_PSP1; RNA recognition motif 1 (RRM1) found in vertebrate paraspeckle protein 1 (PSP1)
      cd12589
      Location:157236
      RRM2_PSP1; RNA recognition motif 2 (RRM2) found in vertebrate paraspeckle protein 1 (PSP1 or PSPC1)
    4. XM_028837136.1XP_028692969.1  paraspeckle component 1 isoform X3

      Conserved Domains (3) summary
      cd12946
      Location:227319
      NOPS_p54nrb_PSF_PSPC1; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSPC1 family proteins
      cd12586
      Location:81151
      RRM1_PSP1; RNA recognition motif 1 in vertebrate paraspeckle protein 1 (PSP1)
      cd12589
      Location:157236
      RRM2_PSP1; RNA recognition motif 2 in vertebrate paraspeckle protein 1 (PSP1 or PSPC1)
    5. XM_015120677.2XP_014976163.2  paraspeckle component 1 isoform X5

      UniProtKB/TrEMBL
      F6XYT7
      Related
      ENSMMUP00000036494.3, ENSMMUT00000043492.3
      Conserved Domains (3) summary
      cd12946
      Location:227319
      NOPS_p54nrb_PSF_PSPC1; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSPC1 family proteins
      cd12589
      Location:157236
      RRM2_PSP1; RNA recognition motif 2 (RRM2) found in vertebrate paraspeckle protein 1 (PSP1 or PSPC1)
      cl17169
      Location:81151
      RRM_SF; RNA recognition motif (RRM) superfamily

    RNA

    1. XR_001440644.2 RNA Sequence

    2. XR_001440645.2 RNA Sequence

    3. XR_003724095.1 RNA Sequence

    4. XR_003724096.1 RNA Sequence

    5. XR_003724097.1 RNA Sequence

    6. XR_003724098.1 RNA Sequence

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