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OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824910, updated on 18-Sep-2024

Summary

Official Symbol
OTP84
Official Full Name
Tetratricopeptide repeat (TPR)-like superfamily protein
Primary source
TAIR:AT3G57430
Locus tag
AT3G57430
See related
Araport:AT3G57430
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ORGANELLE TRANSCRIPT PROCESSING 84
Summary
Encodes a chloroplast RNA editing factor.
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Genomic context

See OTP84 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (21255557..21258488, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene villin 3 Neighboring gene transmembrane protein, putative (DUF288) Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

General gene information

NM_115603.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding PubMed 
enables zinc ion binding  
Component Evidence Code Pubs
located_in chloroplast PubMed 
located_in chloroplast  

General protein information

Preferred Names
Tetratricopeptide repeat (TPR)-like superfamily protein
NP_191302.2
  • ORGANELLE TRANSCRIPT PROCESSING 84 (OTP84); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 46517 Blast hits to 13331 proteins in 240 species: Archae - 0; Bacteria - 7; Metazoa - 55; Fungi - 91; Plants - 45789; Viruses - 0; Other Eukaryotes - 575 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    21255557..21258488 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115603.4NP_191302.2  Tetratricopeptide repeat (TPR)-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191302.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q7Y211, Q9SCM9
    UniProtKB/TrEMBL
    A0A654FIM7
    Conserved Domains (2) summary
    PLN03077
    Location:16888
    PLN03077; Protein ECB2; Provisional
    sd00004
    Location:585612
    PPR; PPR repeat [structural motif]
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