U.S. flag

An official website of the United States government

DET1 light-mediated development protein 1 / deetiolated1 (DET1) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826609, updated on 18-Sep-2024

Summary

Official Symbol
DET1
Official Full Name
light-mediated development protein 1 / deetiolated1 (DET1)
Primary source
TAIR:AT4G10180
Locus tag
AT4G10180
See related
Araport:AT4G10180
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATDET1; DE-ETIOLATED 1; FUS2; FUSCA 2; T9A4.17
Summary
Encodes a nuclear-localized protein that acts as a repressor of photomorphogenesis and may be involved in chromatin remodeling.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See DET1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Sequence:
Chromosome: 4; NC_003075.7 (6346411..6349314)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene SNARE-like superfamily protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene TTF-type zinc finger protein with HAT dimerization domain-containing protein

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

General gene information

NM_117086.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus PubMed 
located_in nucleus  

General protein information

Preferred Names
light-mediated development protein 1 / deetiolated1 (DET1)
NP_192756.2
  • DE-ETIOLATED 1 (DET1); FUNCTIONS IN: catalytic activity; INVOLVED IN: DNA repair, negative regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: De-etiolated protein 1, Det1 (InterPro:IPR019138), Six-hairpin glycosidase-like (InterPro:IPR008928); Has 248 Blast hits to 240 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    6346411..6349314
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117086.4NP_192756.2  light-mediated development protein 1 / deetiolated1 (DET1) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192756.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P48732, Q66GQ4
    UniProtKB/TrEMBL
    A0A5S9XSQ7, A0A654FMZ2
    Conserved Domains (1) summary
    pfam09737
    Location:122542
    Det1; De-etiolated protein 1 Det1
External link. Please review our privacy policy.