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CKL6 casein kinase I-like 6 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828972, updated on 18-Sep-2024

Summary

Official Symbol
CKL6
Official Full Name
casein kinase I-like 6
Primary source
TAIR:AT4G28540
Locus tag
AT4G28540
See related
Araport:AT4G28540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
casein kinase I-like 6; F20O9.240; F20O9_240; PAPK1
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Genomic context

See CKL6 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Sequence:
Chromosome: 4; NC_003075.7 (14106735..14110706)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene cruciferin 3 Neighboring gene NAC domain containing protein 74 Neighboring gene Ypt/Rab-GAP domain of gyp1p superfamily protein Neighboring gene PAK-box/P21-Rho-binding family protein

Bibliography

Interactions

General gene information

NM_118996.5

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in cell junction PubMed 
located_in cell periphery PubMed 
located_in cortical microtubule PubMed 
located_in cortical microtubule PubMed 
located_in cytoplasm  
located_in cytoskeleton PubMed 
located_in endomembrane system PubMed 
located_in plasmodesma PubMed 

General protein information

Preferred Names
casein kinase I-like 6
NP_567812.1
  • casein kinase I-like 6 (CKL6); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasmodesma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: dual specificity kinase 1 (TAIR:AT1G03930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    14106735..14110706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118996.5NP_567812.1  casein kinase I-like 6 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567812.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O65463, Q8LFV8, Q8LPJ1
    UniProtKB/TrEMBL
    A0A178UYK9, A0A5S9XWP7, A0A7G2F1Q2
    Conserved Domains (2) summary
    PHA03307
    Location:302471
    PHA03307; transcriptional regulator ICP4; Provisional
    cd14125
    Location:12286
    STKc_CK1_delta_epsilon; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 delta and epsilon
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