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PRP4 proline-rich protein 4 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830032, updated on 18-Sep-2024

Summary

Official Symbol
PRP4
Official Full Name
proline-rich protein 4
Primary source
TAIR:AT4G38770
Locus tag
AT4G38770
See related
Araport:AT4G38770
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 4; ATPRP4; proline-rich protein 4; T9A14.50; T9A14_50
Summary
Encodes one of four proline-rich proteins in Arabidopsis which are predicted to localize to the cell wall. Transcripts are most abundant in aerial organs of the plant.
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Genomic context

See PRP4 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (18096606..18098633, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene nucleoporin (DUF3414) Neighboring gene rotamase CYP 1 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene pre-mRNA-processing-splicing factor-like protein Neighboring gene uncharacterized protein Neighboring gene ER lumen protein retaining receptor family protein Neighboring gene methylthioadenosine nucleosidase 1

Interactions

General gene information

NM_120037.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in plant-type cell wall PubMed 

General protein information

Preferred Names
proline-rich protein 4
NP_195588.1
  • proline-rich protein 4 (PRP4); CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: proline-rich protein 2 (TAIR:AT2G21140.1); Has 142477 Blast hits to 44863 proteins in 2266 species: Archae - 463; Bacteria - 33947; Metazoa - 50713; Fungi - 14839; Plants - 19672; Viruses - 4087; Other Eukaryotes - 18756 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    18096606..18098633 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120037.4NP_195588.1  proline-rich protein 4 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195588.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B9DHX5, Q9M6T6, Q9M7N8, Q9T0I5
    UniProtKB/TrEMBL
    A0A5S9Y0H3, A0A654FX17
    Conserved Domains (1) summary
    pfam01190
    Location:41110
    Pollen_Ole_e_I; Pollen proteins Ole e I like
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