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hydroxyproline-rich glycoprotein family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829964, updated on 18-Sep-2024

Summary

Official Full Name
hydroxyproline-rich glycoprotein family protein
Primary source
TAIR:AT4G38080
Locus tag
AT4G38080
See related
Araport:AT4G38080
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F20D10.200; F20D10_200
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Genomic context

Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (17882644..17883612)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene basic helix loop helix (bHLH) DNA-binding superfamily protein Neighboring gene basic helix loop helix (bHLH) DNA-binding superfamily protein Neighboring gene transcription factor bHLH131-like protein Neighboring gene ribosomal protein S5 domain protein Neighboring gene exportin-4 protein Neighboring gene CURVATURE THYLAKOID 1D-like protein

General gene information

NM_119969.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
is_active_in cellular_component  

General protein information

Preferred Names
hydroxyproline-rich glycoprotein family protein
NP_195521.1
  • hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, hypocotyl, root; EXPRESSED DURING: C globular stage; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT2G22510.1); Has 4732 Blast hits to 2740 proteins in 428 species: Archae - 22; Bacteria - 604; Metazoa - 1100; Fungi - 265; Plants - 1375; Viruses - 486; Other Eukaryotes - 880 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17882644..17883612
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119969.4NP_195521.1  hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195521.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UW62, Q9SZK8
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