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Chitinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818964, updated on 18-Sep-2024

Summary

Official Full Name
Chitinase family protein
Primary source
TAIR:AT2G43620
Locus tag
AT2G43620
See related
Araport:AT2G43620
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F18O19.27
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Genomic context

Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (18093694..18095093, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Chitinase family protein Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene nucleusenvelope protein Neighboring gene Signal recognition particle, SRP9/SRP14 subunit Neighboring gene ncRNA

Genomic regions, transcripts, and products

Genomic Sequence:
NC_003071.7

Pathways from PubChem

General gene information

NM_129924.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables chitinase activity  

General protein information

Preferred Names
Chitinase family protein
NP_181890.1
  • Chitinase family protein; FUNCTIONS IN: chitin binding, chitinase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43610.1); Has 3021 Blast hits to 2751 proteins in 582 species: Archae - 0; Bacteria - 707; Metazoa - 34; Fungi - 290; Plants - 1778; Viruses - 39; Other Eukaryotes - 173 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    18093694..18095093 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129924.3NP_181890.1  Chitinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181890.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O22841
    UniProtKB/TrEMBL
    A0A178VXW7, A0A5S9X782
    Conserved Domains (2) summary
    cd00325
    Location:94283
    chitinase_GH19; Glycoside hydrolase family 19, chitinase domain
    pfam00187
    Location:3061
    Chitin_bind_1; Chitin recognition protein
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