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helicase with zinc finger protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825343, updated on 18-Sep-2024

Summary

Official Full Name
helicase with zinc finger protein
Primary source
TAIR:AT3G61700
Locus tag
AT3G61700
See related
Araport:AT3G61700
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

Location:
chromosome: 3
Exon count:
9
Sequence:
Chromosome: 3; NC_003074.8 (22835127..22839188)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene nucleotidyltransferase Neighboring gene ncRNA Neighboring gene AUTOPHAGY 6 Neighboring gene tRNA-Gly

General gene information

NM_001084856.2
NM_116035.3

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus  

General protein information

Preferred Names
helicase with zinc finger protein
NP_001078325.1
  • Plant protein 1589 of unknown function; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT2G46420.1); Has 265 Blast hits to 263 proteins in 31 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 3; Plants - 223; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
NP_191729.2
  • Plant protein 1589 of unknown function; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT2G46420.1); Has 261 Blast hits to 259 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    22835127..22839188
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001340121.1NP_001327945.1  helicase with zinc finger protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XNK0, A0A654FJU3, Q56XY3
    Conserved Domains (1) summary
    TIGR01589
    Location:55111
    A_thal_3526; uncharacterized plant-specific domain TIGR01589
  2. NM_001340122.1NP_001327944.1  helicase with zinc finger protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VJ35, A0A1I9LTV9, A0A384K9N6, A0A5S9XNK0
  3. NM_001084856.2NP_001078325.1  helicase with zinc finger protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078325.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XNK0, A0A7G2EVM9, A8MQR1
    Conserved Domains (1) summary
    TIGR01589
    Location:55111
    A_thal_3526; uncharacterized plant-specific domain TIGR01589
  4. NM_116035.3NP_191729.2  helicase with zinc finger protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_191729.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XNK0, A0A654FJU3, Q56XY3
    Conserved Domains (1) summary
    TIGR01589
    Location:55111
    A_thal_3526; uncharacterized plant-specific domain TIGR01589
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