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golgi-to-ER traffic-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836442, updated on 18-Sep-2024

Summary

Official Full Name
golgi-to-ER traffic-like protein
Primary source
TAIR:AT5G63220
Locus tag
AT5G63220
See related
Araport:AT5G63220
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MDC12.19; MDC12_19
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Genomic context

Location:
chromosome: 5
Exon count:
12
Sequence:
Chromosome: 5; NC_003076.8 (25353018..25355535, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Pectin lyase-like superfamily protein Neighboring gene MA3 domain-containing protein Neighboring gene ncRNA Neighboring gene tetratricopeptide repeat (TPR)-containing protein Neighboring gene Carbohydrate-binding X8 domain superfamily protein Neighboring gene Carbohydrate-binding X8 domain superfamily protein

General gene information

NM_001345583.1
NM_001345584.1
NM_125717.6

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in cytosol PubMed 
located_in mitochondrion  

General protein information

Preferred Names
golgi-to-ER traffic-like protein
NP_201127.2
  • unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0363 (InterPro:IPR007317); Has 304 Blast hits to 301 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 121; Plants - 35; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    25353018..25355535 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125717.6NP_201127.2  golgi-to-ER traffic-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201127.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q6GKV1, Q9FMK1
    UniProtKB/TrEMBL
    A0A178UDZ4, A0A7G2FPE2
    Conserved Domains (1) summary
    pfam04190
    Location:46320
    DUF410; Protein of unknown function (DUF410)
  2. NM_001345583.1NP_001332494.1  golgi-to-ER traffic-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BH44, A0A7G2FPE2
  3. NM_001345584.1NP_001332493.1  golgi-to-ER traffic-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BH52, A0A7G2FPE2
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