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ATSLY1 Sec1/munc18-like (SM) proteins superfamily [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816310, updated on 18-Sep-2024

Summary

Official Symbol
ATSLY1
Official Full Name
Sec1/munc18-like (SM) proteins superfamily
Primary source
TAIR:AT2G17980
Locus tag
AT2G17980
See related
Araport:AT2G17980
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T27K22.15; T27K22_15
Summary
member of SLY1 Gene Family
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Genomic context

See ATSLY1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (7824166..7826623)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene zinc finger (Ran-binding) family protein Neighboring gene polyamine-modulated factor 1-binding protein Neighboring gene TBP-associated factor 14

Genomic regions, transcripts, and products

Genomic Sequence:
NC_003071.7

Pathways from PubChem

Interactions

General gene information

NM_127354.5

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in mitochondrion PubMed 

General protein information

Preferred Names
Sec1/munc18-like (SM) proteins superfamily
NP_179389.1
  • ATSLY1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT4G31740.1); Has 1583 Blast hits to 1569 proteins in 233 species: Archae - 0; Bacteria - 15; Metazoa - 661; Fungi - 409; Plants - 204; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    7824166..7826623
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127354.5NP_179389.1  Sec1/munc18-like (SM) proteins superfamily [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179389.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SL48
    UniProtKB/TrEMBL
    A0A178VQN7, A0A5S9WYZ4, B9DHU5
    Conserved Domains (1) summary
    pfam00995
    Location:35598
    Sec1; Sec1 family
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