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Plant invertase/pectin methylesterase inhibitor superfamily [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819728, updated on 18-Sep-2024

Summary

Official Full Name
Plant invertase/pectin methylesterase inhibitor superfamily
Primary source
TAIR:AT3G05620
Locus tag
AT3G05620
See related
Araport:AT3G05620
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F18C1.11; F18C1_11
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Genomic context

Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (1629488..1631818, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene phospholipase D P2 Neighboring gene Protein phosphatase 2C family protein

General gene information

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables enzyme inhibitor activity  
enables pectinesterase activity  
Process Evidence Code Pubs
involved_in cell wall modification  
involved_in pectin catabolic process  
Component Evidence Code Pubs
is_active_in cellular_component  

General protein information

Preferred Names
Plant invertase/pectin methylesterase inhibitor superfamily
NP_187213.1
  • Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: shoot, leaf apex, hypocotyl, flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G43270.1); Has 2961 Blast hits to 2901 proteins in 339 species: Archae - 6; Bacteria - 635; Metazoa - 1; Fungi - 198; Plants - 2096; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    1629488..1631818 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111435.2NP_187213.1  Plant invertase/pectin methylesterase inhibitor superfamily [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187213.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9M9W7
    UniProtKB/TrEMBL
    A0A178VCU2, A0A5S9XA17
    Conserved Domains (1) summary
    PLN02506
    Location:1543
    PLN02506; putative pectinesterase/pectinesterase inhibitor
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