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peptide upstream protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824508, updated on 18-Sep-2024

Summary

Official Full Name
peptide upstream protein
Primary source
TAIR:AT3G53400
Locus tag
AT3G53400
See related
Araport:AT3G53400
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (19798107..19800136)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Concanavalin A-like lectin protein kinase family protein Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene miscRNA Neighboring gene RING/U-box superfamily protein

General gene information

Miscellaneous features

  • Loc: 19798340-19798456 AT3G53400.uORF1
NM_115200.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in extracellular region  

General protein information

Preferred Names
peptide upstream protein
NP_190908.1
  • BEST Arabidopsis thaliana protein match is: conserved peptide upstream open reading frame 47 (TAIR:AT5G03190.1); Has 285 Blast hits to 285 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    19798107..19800136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115200.4NP_190908.1  peptide upstream protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190908.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FGZ6, Q9LFH7
    Conserved Domains (1) summary
    cl17173
    Location:162199
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
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