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LOC101885155 uncharacterized LOC101885155 [ Danio rerio (zebrafish) ]

Gene ID: 101885155, updated on 12-Sep-2024

Summary

Gene symbol
LOC101885155
Gene description
uncharacterized LOC101885155
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

See LOC101885155 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (41058225..41065343)
105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (41106308..41110028)

Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene si:dkey-16j16.4 Neighboring gene mitochondrial ribosomal protein L33 Neighboring gene ribokinase Neighboring gene BRISC and BRCA1 A complex member 2 Neighboring gene FOS like 2, AP-1 transcription factor subunit

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
uncharacterized protein LOC101885155

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007128.7 Reference GRCz11 Primary Assembly

    Range
    41058225..41065343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021467516.2XP_021323191.1  uncharacterized protein LOC101885155

    UniProtKB/TrEMBL
    A0A8M9PLQ1
    Conserved Domains (4) summary
    cd01644
    Location:9201141
    RT_pepA17; Reverse transcriptase (RTs) in retrotransposons. This subfamily represents the RT domain of a multifunctional enzyme. C-terminal to the RT domain is a domain homologous to aspartic proteinases (corresponding to Merops family A17) encoded by ...
    pfam03564
    Location:261390
    DUF1759; Protein of unknown function (DUF1759)
    pfam00665
    Location:16631755
    rve; Integrase core domain
    pfam05380
    Location:11551318
    Peptidase_A17; Pao retrotransposon peptidase

RNA

  1. XR_002455981.2 RNA Sequence

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