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ECT9 evolutionarily conserved C-terminal region 9 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839689, updated on 18-Sep-2024

Summary

Official Symbol
ECT9
Official Full Name
evolutionarily conserved C-terminal region 9
Primary source
TAIR:AT1G27960
Locus tag
AT1G27960
See related
Araport:AT1G27960
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
evolutionarily conserved C-terminal region 9; F13K9.7; F13K9_7
Summary
encodes a protein whose C-terminal region is similar to ECT1 and ECT2, which bind to CIPK1.
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Genomic context

See ECT9 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Sequence:
Chromosome: 1; NC_003070.9 (9742137..9745796, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene glucuronoxylan 4-O-methyltransferase-like protein (DUF579) Neighboring gene P-glycoprotein 13 Neighboring gene glycosylphosphatidylinositol-anchored lipid protein transfer 1 Neighboring gene nuclear transport factor 2B Neighboring gene dihydrosphingosine phosphate lyase Neighboring gene uncharacterized protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001332793.1
NM_001332794.1
NM_102561.5

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
evolutionarily conserved C-terminal region 9
NP_174117.2
  • evolutionarily conserved C-terminal region 9 (ECT9); CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 5 (TAIR:AT3G13060.2); Has 956 Blast hits to 946 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 416; Fungi - 120; Plants - 329; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    9742137..9745796 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102561.5NP_174117.2  evolutionarily conserved C-terminal region 9 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174117.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EDC5, A0A7G2DTN3, Q500V8
    Conserved Domains (1) summary
    pfam04146
    Location:330467
    YTH; YT521-B-like domain
  2. NM_001332793.1NP_001322517.1  evolutionarily conserved C-terminal region 9 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WBN0, A0A1P8AUC1
  3. NM_001332794.1NP_001322518.1  evolutionarily conserved C-terminal region 9 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WES0, A0A1P8AU98