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col-150 Nematode cuticle collagen N-terminal domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 181814, updated on 9-Dec-2024

Summary

Official Symbol
col-150
Official Full Name
Nematode cuticle collagen N-terminal domain-containing protein
Primary source
WormBase:WBGene00000723
Locus tag
CELE_B0024.2
See related
AllianceGenome:WB:WBGene00000723
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See col-150 in Genome Data Viewer
Location:
chromosome: V
Exon count:
2
Sequence:
Chromosome: V; NC_003283.11 (10293563..10294649, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene CX domain-containing protein Neighboring gene Hexosyltransferase Neighboring gene Nematode cuticle collagen N-terminal domain-containing protein Neighboring gene ncRNA Neighboring gene CUB_2 domain-containing protein

General gene information

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
part_of collagen trimer  
located_in membrane  

General protein information

Preferred Names
Nematode cuticle collagen N-terminal domain-containing protein
NP_505647.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    10293563..10294649 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073246.5NP_505647.1  Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_505647.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q17418
    Conserved Domains (3) summary
    pfam01391
    Location:150208
    Collagen; Collagen triple helix repeat (20 copies)
    smart01088
    Location:658
    Col_cuticle_N; Nematode cuticle collagen N-terminal domain
    PRK14086
    Location:122278
    dnaA; chromosomal replication initiator protein DnaA
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