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    Vacuolar calcium-binding protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842545, updated on 18-Sep-2024

    Summary

    Official Full Name
    Vacuolar calcium-binding protein-like protein
    Primary source
    TAIR:AT1G62480
    Locus tag
    AT1G62480
    See related
    Araport:AT1G62480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T3P18.4; T3P18_4
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (23128651..23129759)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Immunoglobulin E-set superfamily protein Neighboring gene pseudo Neighboring gene Mitochondrial transcription termination factor family protein Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

    Interactions

    General gene information

    NM_104927.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in cytosol PubMed 
    located_in cytosol PubMed 
    located_in nucleus PubMed 
    located_in nucleus  

    General protein information

    Preferred Names
    Vacuolar calcium-binding protein-like protein
    NP_564795.1
    • Vacuolar calcium-binding protein-related; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 21787 Blast hits to 9668 proteins in 1087 species: Archae - 111; Bacteria - 3941; Metazoa - 6730; Fungi - 2179; Plants - 741; Viruses - 179; Other Eukaryotes - 7906 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      23128651..23129759
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104927.3NP_564795.1  Vacuolar calcium-binding protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564795.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0Z2B3, Q8LBZ8, Q9SXE9
      Conserved Domains (1) summary
      PRK10811
      Location:5150
      rne; ribonuclease E; Reviewed
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