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Krtap5-4 keratin associated protein 5-4 [ Mus musculus (house mouse) ]

Gene ID: 50775, updated on 9-Dec-2024

Summary

Official Symbol
Krtap5-4provided by MGI
Official Full Name
keratin associated protein 5-4provided by MGI
Primary source
MGI:MGI:1354758
See related
Ensembl:ENSMUSG00000045236 AllianceGenome:MGI:1354758
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable identical protein binding activity. Predicted to be located in cytosol and keratin filament. Is expressed in skin. Orthologous to several human genes including KRTAP5-10 (keratin associated protein 5-10); KRTAP5-11 (keratin associated protein 5-11); and KRTAP5-2 (keratin associated protein 5-2). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See Krtap5-4 in Genome Data Viewer
Location:
7 F5; 7 87.87 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (141857239..141858240)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (142303502..142304503)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene 45889 Neighboring gene keratin associated protein 5-1 Neighboring gene predicted gene 5054 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:149508605-149508858 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:149509431-149509643 Neighboring gene interferon induced transmembrane protein 10 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:149539783-149540069

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding  
enables molecular_function  
Component Evidence Code Pubs
is_active_in cellular_component  
located_in cytosol  
located_in keratin filament  

General protein information

Preferred Names
keratin-associated protein 5-4
Names
UHS-Ser-2
ultra high sulfur serine protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_015809.2 → NP_056624.1  keratin-associated protein 5-4

    See identical proteins and their annotated locations for NP_056624.1

    Status: VALIDATED

    Source sequence(s)
    AC034099
    Consensus CDS
    CCDS22027.1
    UniProtKB/Swiss-Prot
    Q62220
    Related
    ENSMUSP00000059461.5, ENSMUST00000061403.6

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    141857239..141858240
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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