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    Rbbp9 retinoblastoma binding protein 9, serine hydrolase [ Mus musculus (house mouse) ]

    Gene ID: 26450, updated on 9-Dec-2024

    Summary

    Official Symbol
    Rbbp9provided by MGI
    Official Full Name
    retinoblastoma binding protein 9, serine hydrolaseprovided by MGI
    Primary source
    MGI:MGI:1347074
    See related
    Ensembl:ENSMUSG00000027428 AllianceGenome:MGI:1347074
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Bog
    Summary
    Predicted to enable hydrolase activity. Acts upstream of or within positive regulation of gene expression; response to nematode; and type II pneumocyte differentiation. Predicted to be located in nucleoplasm. Orthologous to human RBBP9 (RB binding protein 9, serine hydrolase). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in bladder adult (RPKM 13.0), CNS E11.5 (RPKM 11.8) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Rbbp9 in Genome Data Viewer
    Location:
    2 G1; 2 71.02 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (144384185..144392779, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (144542265..144550859, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_05917 Neighboring gene double zinc ribbon and ankyrin repeat domains 1 Neighboring gene STARR-seq mESC enhancer starr_05918 Neighboring gene polymerase (RNA) III (DNA directed) polypeptide F Neighboring gene STARR-positive B cell enhancer ABC_E1603 Neighboring gene predicted gene, 34292 Neighboring gene SEC23 homolog B, COPII coat complex component Neighboring gene small integral membrane protein 26

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables hydrolase activity  
    enables molecular_function  
    Component Evidence Code Pubs
    located_in nucleoplasm  
    located_in nucleoplasm  

    General protein information

    Preferred Names
    putative hydrolase RBBP9
    Names
    B5T-overexpressed gene protein
    RBBP-9
    retinoblastoma-binding protein 9

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_015754.2NP_056569.2  putative hydrolase RBBP9

      See identical proteins and their annotated locations for NP_056569.2

      Status: VALIDATED

      Source sequence(s)
      AK076944, BC050201, BY256564
      Consensus CDS
      CCDS16821.1
      UniProtKB/Swiss-Prot
      O88851, Q9CYJ9
      UniProtKB/TrEMBL
      A2AN96, Q80YU9
      Related
      ENSMUSP00000028915.6, ENSMUST00000028915.6
      Conserved Domains (1) summary
      cl21494
      Location:8173
      Abhydrolase; alpha/beta hydrolases

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      144384185..144392779 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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