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PR1 pathogenesis-related protein 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 815949, updated on 18-Sep-2024

Summary

Official Symbol
PR1
Official Full Name
pathogenesis-related protein 1
Primary source
TAIR:AT2G14610
Locus tag
AT2G14610
See related
Araport:AT2G14610
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATPR1; pathogenesis-related gene 1; PATHOGENESIS-RELATED GENE 1; PATHOGENESIS-RELATED PROTEIN 1; PR 1; T6B13.15; T6B13_15
Summary
PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive.
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Genomic context

See PR1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (6241640..6242541, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene xyloglucan endotransglucosylase/hydrolase 10 Neighboring gene pseudo

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

NM_127025.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables cytokine activity PubMed 
enables protein binding PubMed 

General protein information

Preferred Names
pathogenesis-related protein 1
NP_179068.1
  • pathogenesis-related gene 1 (PR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to vitamin B1, response to jasmonic acid stimulus, systemic acquired resistance, defense response; LOCATED IN: extracellular region, cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3124 Blast hits to 3017 proteins in 378 species: Archae - 0; Bacteria - 64; Metazoa - 1706; Fungi - 335; Plants - 914; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    6241640..6242541 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127025.3NP_179068.1  pathogenesis-related protein 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179068.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P33154, Q1PF70
    UniProtKB/TrEMBL
    A0MEL2
    Conserved Domains (1) summary
    cd05381
    Location:30161
    SCP_PR-1_like; SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal ...
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