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CAAX protease self-immunity protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827507, updated on 18-Sep-2024

Summary

Official Full Name
CAAX protease self-immunity protein
Primary source
TAIR:AT4G17840
Locus tag
AT4G17840
See related
Araport:AT4G17840
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T6K21.20; T6K21_20
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Genomic context

Location:
chromosome: 4
Exon count:
9
Sequence:
Chromosome: 4; NC_003075.7 (9918052..9920511, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene C2H2 and C2HC zinc fingers superfamily protein Neighboring gene pseudo Neighboring gene Peptidase M20/M25/M40 family protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene carboxyl-terminal proteinase-like protein, putative (DUF239)

General gene information

NM_117893.5

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in chloroplast  

General protein information

Preferred Names
CAAX protease self-immunity protein
NP_567542.1
  • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    9918052..9920511 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117893.5NP_567542.1  CAAX protease self-immunity protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567542.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V6N4, Q0WMZ7, Q8LAI8
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