U.S. flag

An official website of the United States government

parvaa parvin, alpha a [ Danio rerio (zebrafish) ]

Gene ID: 442922, updated on 9-Dec-2024

Summary

Official Symbol
parvaaprovided by ZNC
Official Full Name
parvin, alpha aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040721-2
See related
Ensembl:ENSDARG00000043710 AllianceGenome:ZFIN:ZDB-GENE-040721-2
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
parva; wu:fc59e06; zgc:101643
Summary
Predicted to enable actin binding activity. Predicted to be involved in several processes, including cilium assembly; establishment or maintenance of cell polarity regulating cell shape; and substrate adhesion-dependent cell spreading. Predicted to act upstream of or within cell adhesion. Predicted to be active in actin cytoskeleton; cytoplasm; and focal adhesion. Orthologous to human PARVA (parvin alpha). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See parvaa in Genome Data Viewer
Location:
chromosome: 25
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (16312260..16345430)
105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (16215860..16249030)

Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene si:dkey-80c24.1 Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 2b Neighboring gene TEA domain family member 1a Neighboring gene Ras association domain family member 10a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Clone Names

  • MGC101643

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables actin binding  
enables actin binding  
Process Evidence Code Pubs
involved_in actin cytoskeleton organization  
acts_upstream_of_or_within actin cytoskeleton organization  
acts_upstream_of_or_within cell adhesion  
involved_in cilium assembly  
involved_in establishment or maintenance of cell polarity regulating cell shape  
involved_in substrate adhesion-dependent cell spreading  
Component Evidence Code Pubs
is_active_in actin cytoskeleton  
is_active_in cytoplasm  
is_active_in focal adhesion  

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002872.2NP_001002872.1  parvin, alpha a

    See identical proteins and their annotated locations for NP_001002872.1

    Status: PROVISIONAL

    Source sequence(s)
    BC085399
    UniProtKB/TrEMBL
    B2GP46, F6P6U8, Q6DRM4
    Related
    ENSDARP00000064186.6, ENSDART00000064187.7
    Conserved Domains (1) summary
    pfam00307
    Location:96197
    CH; Calponin homology (CH) domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007136.7 Reference GRCz11 Primary Assembly

    Range
    16312260..16345430
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Loading
External link. Please review our privacy policy.