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ARHGEF26-AS1 ARHGEF26 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100507524, updated on 10-Dec-2024

Summary

Official Symbol
ARHGEF26-AS1provided by HGNC
Official Full Name
ARHGEF26 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:41048
See related
Ensembl:ENSG00000243069 AllianceGenome:HGNC:41048
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in brain (RPKM 3.9), lung (RPKM 1.3) and 6 other tissues See more
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Genomic context

See ARHGEF26-AS1 in Genome Data Viewer
Location:
3q25.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (154024401..154121210, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (156795416..156892223, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (153742190..153838999, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene U8 small nucleolar RNA Neighboring gene ribosomal protein L21 pseudogene 42 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_65370 Neighboring gene Rho guanine nucleotide exchange factor 26 Neighboring gene uncharacterized LOC105374167 Neighboring gene MPRA-validated peak4869 silencer Neighboring gene DEAH-box helicase 36 Neighboring gene Sharpr-MPRA regulatory region 7914

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

General gene information

Other Names

  • ARHGEF26 antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_037901.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC018452, AC068985, AC073908
    Related
    ENST00000491862.6

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    154024401..154121210 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    156795416..156892223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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