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Eif1b eukaryotic translation initiation factor 1B [ Mus musculus (house mouse) ]

Gene ID: 68969, updated on 9-Dec-2024

Summary

Official Symbol
Eif1bprovided by MGI
Official Full Name
eukaryotic translation initiation factor 1Bprovided by MGI
Primary source
MGI:MGI:1916219
See related
Ensembl:ENSMUSG00000006941 AllianceGenome:MGI:1916219
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gc20; 1500010M16Rik; 3110001N14Rik
Summary
Predicted to enable RNA binding activity; ribosomal small subunit binding activity; and translation initiation factor activity. Predicted to be involved in translational initiation. Predicted to be part of eukaryotic 43S preinitiation complex. Is expressed in several structures, including brain; cardiovascular system; genitourinary system; gut; and hemolymphoid system gland. Orthologous to human EIF1B (eukaryotic translation initiation factor 1B). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Ubiquitous expression in CNS E18 (RPKM 70.4), CNS E14 (RPKM 53.2) and 28 other tissues See more
Orthologs
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Genomic context

See Eif1b in Genome Data Viewer
Location:
9 F4; 9 71.67 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (120321672..120324393)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (120492606..120495327)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene myosin VIIA and Rab interacting protein Neighboring gene ATP synthase F(0) complex subunit C2, mitochondrial pseudogene Neighboring gene RIKEN cDNA D830035M03 gene Neighboring gene predicted gene 7229 Neighboring gene ectonucleoside triphosphate diphosphohydrolase 3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Interactions

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables RNA binding  
enables ribosomal small subunit binding  
enables translation initiation factor activity  
enables translation initiation factor activity  
Component Evidence Code Pubs
part_of eukaryotic 43S preinitiation complex  

General protein information

Preferred Names
eukaryotic translation initiation factor 1b
Names
translation factor sui1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026892.3NP_081168.1  eukaryotic translation initiation factor 1b

    See identical proteins and their annotated locations for NP_081168.1

    Status: VALIDATED

    Source sequence(s)
    AI154212, AK005192, AK013965
    Consensus CDS
    CCDS23628.1
    UniProtKB/Swiss-Prot
    Q9CXU9
    UniProtKB/TrEMBL
    Q3UBT8
    Related
    ENSMUSP00000007139.5, ENSMUST00000007139.6
    Conserved Domains (1) summary
    cl00229
    Location:4113
    eIF1_SUI1_like; Eukaryotic initiation factor 1 and related proteins

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    120321672..120324393
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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