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APS4 Pseudouridine synthase/archaeosine transglycosylase-like family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834400, updated on 18-Sep-2024

Summary

Official Symbol
APS4
Official Full Name
Pseudouridine synthase/archaeosine transglycosylase-like family protein
Primary source
TAIR:AT5G43780
Locus tag
AT5G43780
See related
Araport:AT5G43780
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MQD19.13; MQD19_13
Summary
sulfate adenylyltransferase, ATP sulfurylase
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Genomic context

See APS4 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (17589394..17591737, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene non-LTR retrolelement reverse transcriptase-like protein Neighboring gene 3-ketoacyl-CoA synthase 20 Neighboring gene proline-rich family protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene pseudo

Pathways from PubChem

Interactions

General gene information

NM_123745.6

Gene Ontology Provided by TAIR

General protein information

Preferred Names
Pseudouridine synthase/archaeosine transglycosylase-like family protein
NP_199191.1
  • APS4; FUNCTIONS IN: sulfate adenylyltransferase (ATP) activity; INVOLVED IN: sulfate assimilation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase/archaeosine transglycosylase-like family protein (TAIR:AT4G14680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    17589394..17591737 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123745.6NP_199191.1  Pseudouridine synthase/archaeosine transglycosylase-like family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199191.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WWX9, Q9S7D8
    UniProtKB/TrEMBL
    A0A178U9N0, A0A5S9YAX1
    Conserved Domains (2) summary
    cd00517
    Location:84449
    ATPS; ATP-sulfurylase
    TIGR00339
    Location:56448
    sopT; ATP sulphurylase
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