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PLDALPHA2 phospholipase D alpha 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841689, updated on 18-Sep-2024

Summary

Official Symbol
PLDALPHA2
Official Full Name
phospholipase D alpha 2
Primary source
TAIR:AT1G52570
Locus tag
AT1G52570
See related
Araport:AT1G52570
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F6D8.21; F6D8_21; PHOSPHOLIPASE D; phospholipase D alpha 2
Summary
member of C2-PLD subfamily
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Genomic context

See PLDALPHA2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (19583617..19587531, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene HSP20-like chaperones superfamily protein Neighboring gene cytochrome P450 family protein Neighboring gene ncRNA Neighboring gene RHOMBOID-like protein 5 Neighboring gene Putative thiol-disulfide oxidoreductase DCC

Genomic regions, transcripts, and products

Genomic Sequence:
NC_003070.9

Pathways from PubChem

Interactions

General gene information

NM_001333553.1
NM_001333554.1
NM_104135.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables N-acylphosphatidylethanolamine-specific phospholipase D activity  
enables calcium ion binding  
enables phospholipase D activity  
enables phospholipase D activity  

General protein information

Preferred Names
phospholipase D alpha 2
NP_175666.1
  • phospholipase D alpha 2 (PLDALPHA2); FUNCTIONS IN: phospholipase D activity; INVOLVED IN: phosphatidylcholine metabolic process, metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D (InterPro:IPR015679), Phospholipase D, plant (InterPro:IPR011402), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 1 (TAIR:AT3G15730.1); Has 2026 Blast hits to 1555 proteins in 414 species: Archae - 2; Bacteria - 579; Metazoa - 311; Fungi - 419; Plants - 577; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    19583617..19587531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104135.3NP_175666.1  phospholipase D alpha 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175666.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SSQ9
    UniProtKB/TrEMBL
    A0A178WFN9, A0A5S9WLP7, A0A654EHV2
    Conserved Domains (1) summary
    PLN02270
    Location:1810
    PLN02270; phospholipase D alpha
  2. NM_001333553.1NP_001322921.1  phospholipase D alpha 2 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SSQ9
    UniProtKB/TrEMBL
    A0A178WFN9, A0A5S9WLP7, A0A654EHV2
    Conserved Domains (1) summary
    PLN02270
    Location:1810
    PLN02270; phospholipase D alpha
  3. NM_001333554.1NP_001322920.1  phospholipase D alpha 2 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SSQ9
    UniProtKB/TrEMBL
    A0A178WFN9, A0A5S9WLP7, A0A654EHV2
    Conserved Domains (1) summary
    PLN02270
    Location:1810
    PLN02270; phospholipase D alpha
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