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Hspa12b heat shock protein family A (Hsp70) member 12B [ Rattus norvegicus (Norway rat) ]

Gene ID: 311427, updated on 9-Dec-2024

Summary

Official Symbol
Hspa12bprovided by RGD
Official Full Name
heat shock protein family A (Hsp70) member 12Bprovided by RGD
Primary source
RGD:1312004
See related
EnsemblRapid:ENSRNOG00000021244 AllianceGenome:RGD:1312004
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human HSPA12B (heat shock protein family A (Hsp70) member 12B). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Biased expression in Lung (RPKM 182.5), Heart (RPKM 136.0) and 9 other tissues See more
Orthologs
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Genomic context

See Hspa12b in Genome Data Viewer
Location:
3q36
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (138799396..138817396)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (118346372..118364374)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (123670219..123688640)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene ribosomal protein L12, pseudogene 12 Neighboring gene adipose secreted signaling protein Neighboring gene sperm flagellar 1

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General protein information

Preferred Names
heat shock 70 kDa protein 12B
Names
heat shock protein 12B
heat shock protein 70kDa 12B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001395016.1NP_001381945.1  heat shock 70 kDa protein 12B

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000003
    UniProtKB/TrEMBL
    A0A8I5Y935, D3ZVM5
    Related
    ENSRNOP00000028856.6, ENSRNOT00000028856.9
    Conserved Domains (1) summary
    cl17037
    Location:61529
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
  2. NM_001395017.1NP_001381946.1  heat shock 70 kDa protein 12B

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000003
    UniProtKB/TrEMBL
    A0A8I5Y935, D3ZVM5
    Conserved Domains (1) summary
    cl17037
    Location:61529
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    138799396..138817396
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

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