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hypothetical protein (DUF239) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832614, updated on 18-Sep-2024

Summary

Official Full Name
hypothetical protein (DUF239)
Primary source
TAIR:AT5G25415
Locus tag
AT5G25415
See related
Araport:AT5G25415
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

Location:
chromosome: 5
Exon count:
8
Sequence:
Chromosome: 5; NC_003076.8 (8834206..8837248)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Nucleotide-sugar transporter family protein Neighboring gene transmembrane protein, putative (DUF239) Neighboring gene Xanthine/uracil/vitamin C permease Neighboring gene glycine-rich protein

General gene information

NM_122451.2

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
is_active_in cellular_component  

General protein information

Preferred Names
hypothetical protein (DUF239)
NP_568471.1
  • Protein of Unknown Function (DUF239); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT5G25410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    8834206..8837248
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122451.2NP_568471.1  hypothetical protein (DUF239) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568471.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4JWS2
    Conserved Domains (2) summary
    pfam03080
    Location:106329
    DUF239; Domain of unknown function (DUF239)
    pfam14365
    Location:6588
    DUF4409; Domain of unknown function (DUF4409)
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