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    Zfp266 zinc finger protein 266 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 367034, updated on 9-Dec-2024

    Summary

    Official Symbol
    Zfp266provided by RGD
    Official Full Name
    zinc finger protein 266provided by RGD
    Primary source
    RGD:1308643
    See related
    EnsemblRapid:ENSRNOG00000034037 AllianceGenome:RGD:1308643
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Zfp426; Znf266; Zfp426l
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to several human genes including ZNF426 (zinc finger protein 426). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Adrenal (RPKM 178.4), Thymus (RPKM 176.8) and 9 other tissues See more
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    Genomic context

    See Zfp266 in Genome Data Viewer
    Location:
    8q13
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (27307015..27338624, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (19030766..19061381, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (21511831..21543275, complement)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 26 Neighboring gene U6 spliceosomal RNA Neighboring gene zinc finger protein 426 Neighboring gene ribosomal protein SA, pseudogene 20 Neighboring gene zinc finger protein 846

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    is_active_in nucleus  

    General protein information

    Preferred Names
    zinc finger protein 426-like
    Names
    zinc finger protein 426

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001135018.1NP_001128490.1  zinc finger protein 426-like

      See identical proteins and their annotated locations for NP_001128490.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000008
      UniProtKB/TrEMBL
      F1MAL0
      Conserved Domains (4) summary
      smart00349
      Location:4197
      KRAB; krueppel associated box
      COG5048
      Location:397588
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:429449
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:371393
      zf-C2H2; Zinc finger, C2H2 type

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      27307015..27338624 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039081847.2XP_038937775.1  zinc finger protein 426-like isoform X3

      Conserved Domains (4) summary
      COG5048
      Location:328519
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:360380
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:302324
      zf-C2H2; Zinc finger, C2H2 type
      cl02581
      Location:128
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    2. XM_063265865.1XP_063121935.1  zinc finger protein 426-like isoform X1

      UniProtKB/TrEMBL
      F1MAL0
    3. XM_039081846.2XP_038937774.1  zinc finger protein 426-like isoform X3

      Conserved Domains (4) summary
      COG5048
      Location:328519
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:360380
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:302324
      zf-C2H2; Zinc finger, C2H2 type
      cl02581
      Location:128
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    4. XM_039081845.2XP_038937773.1  zinc finger protein 426-like isoform X3

      Conserved Domains (4) summary
      COG5048
      Location:328519
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:360380
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:302324
      zf-C2H2; Zinc finger, C2H2 type
      cl02581
      Location:128
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    5. XM_039081843.2XP_038937771.1  zinc finger protein 426-like isoform X1

      UniProtKB/TrEMBL
      F1MAL0
      Conserved Domains (4) summary
      smart00349
      Location:4197
      KRAB; krueppel associated box
      COG5048
      Location:397588
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:429449
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:371393
      zf-C2H2; Zinc finger, C2H2 type
    6. XM_039081844.2XP_038937772.1  zinc finger protein 426-like isoform X2

      Conserved Domains (4) summary
      COG5048
      Location:370561
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:402422
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:344366
      zf-C2H2; Zinc finger, C2H2 type
      pfam01352
      Location:4080
      KRAB; KRAB box
    7. XM_017595777.3XP_017451266.1  zinc finger protein 426-like isoform X1

      UniProtKB/TrEMBL
      F1MAL0
      Conserved Domains (4) summary
      smart00349
      Location:4197
      KRAB; krueppel associated box
      COG5048
      Location:397588
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:429449
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:371393
      zf-C2H2; Zinc finger, C2H2 type
    8. XM_063265863.1XP_063121933.1  zinc finger protein 426-like isoform X1

      UniProtKB/TrEMBL
      F1MAL0
    9. XM_039081848.2XP_038937776.1  zinc finger protein 426-like isoform X3

      Conserved Domains (4) summary
      COG5048
      Location:328519
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:360380
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:302324
      zf-C2H2; Zinc finger, C2H2 type
      cl02581
      Location:128
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    10. XM_039081840.2XP_038937768.1  zinc finger protein 426-like isoform X1

      UniProtKB/TrEMBL
      F1MAL0
      Conserved Domains (4) summary
      smart00349
      Location:4197
      KRAB; krueppel associated box
      COG5048
      Location:397588
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:429449
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:371393
      zf-C2H2; Zinc finger, C2H2 type
    11. XM_039081834.2XP_038937762.1  zinc finger protein 426-like isoform X1

      UniProtKB/TrEMBL
      F1MAL0
      Conserved Domains (4) summary
      smart00349
      Location:4197
      KRAB; krueppel associated box
      COG5048
      Location:397588
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:429449
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:371393
      zf-C2H2; Zinc finger, C2H2 type
    12. XM_039081841.2XP_038937769.1  zinc finger protein 426-like isoform X1

      UniProtKB/TrEMBL
      F1MAL0
      Conserved Domains (4) summary
      smart00349
      Location:4197
      KRAB; krueppel associated box
      COG5048
      Location:397588
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:429449
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:371393
      zf-C2H2; Zinc finger, C2H2 type
    13. XM_063265864.1XP_063121934.1  zinc finger protein 426-like isoform X1

      UniProtKB/TrEMBL
      F1MAL0
    14. XM_039081835.2XP_038937763.1  zinc finger protein 426-like isoform X1

      UniProtKB/TrEMBL
      F1MAL0
      Conserved Domains (4) summary
      smart00349
      Location:4197
      KRAB; krueppel associated box
      COG5048
      Location:397588
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:429449
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:371393
      zf-C2H2; Zinc finger, C2H2 type
    15. XM_039081836.2XP_038937764.1  zinc finger protein 426-like isoform X1

      UniProtKB/TrEMBL
      F1MAL0
      Conserved Domains (4) summary
      smart00349
      Location:4197
      KRAB; krueppel associated box
      COG5048
      Location:397588
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:429449
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:371393
      zf-C2H2; Zinc finger, C2H2 type
    16. XM_039081842.2XP_038937770.1  zinc finger protein 426-like isoform X1

      UniProtKB/TrEMBL
      F1MAL0
      Conserved Domains (4) summary
      smart00349
      Location:4197
      KRAB; krueppel associated box
      COG5048
      Location:397588
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:429449
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:371393
      zf-C2H2; Zinc finger, C2H2 type
    17. XM_063265866.1XP_063121936.1  zinc finger protein 426-like isoform X1

      UniProtKB/TrEMBL
      F1MAL0
      Related
      ENSRNOP00000042506.5, ENSRNOT00000042903.7
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