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RNF138P1 ring finger protein 138 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 379013, updated on 10-Dec-2024

Summary

Official Symbol
RNF138P1provided by HGNC
Official Full Name
ring finger protein 138 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:30342
See related
AllianceGenome:HGNC:30342
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See RNF138P1 in Genome Data Viewer
Location:
5q11.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (55528842..55534542, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (56356428..56362133, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (54824670..54830370, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene Mtr4 exosome RNA helicase Neighboring gene uncharacterized LOC124900977 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16015 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:54733965-54734792 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:54737283-54737821 Neighboring gene phospholipid phosphatase 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:54797624-54798166 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:54798167-54798709 Neighboring gene microRNA 5687 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16016 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22555 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:54870447-54871333 Neighboring gene adenylate kinase 4 pseudogene 2 Neighboring gene uncharacterized LOC124900980 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:54899656-54900855

Genomic regions, transcripts, and products

General gene information

Other Names

  • ring finger protein 138, E3 ubiquitin protein ligase pseudogene 1

Clone Names

  • FLJ42210

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_001575.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC025777

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    55528842..55534542 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    56356428..56362133 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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