U.S. flag

An official website of the United States government

CNGC15 cyclic nucleotide-gated channel 15 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817372, updated on 18-Sep-2024

Summary

Official Symbol
CNGC15
Official Full Name
cyclic nucleotide-gated channel 15
Primary source
TAIR:AT2G28260
Locus tag
AT2G28260
See related
Araport:AT2G28260
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATCNGC15; cyclic nucleotide-gated channel 15; T3B23.7; T3B23_7
Summary
member of Cyclic nucleotide gated channel family
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See CNGC15 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Sequence:
Chromosome: 2; NC_003071.7 (12049443..12052643)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ATP-dependent helicase family protein Neighboring gene ncRNA Neighboring gene Protein kinase superfamily protein Neighboring gene ncRNA Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene miscRNA

General gene information

NM_001336157.1
NM_128386.2

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in plasma membrane PubMed 

General protein information

Preferred Names
cyclic nucleotide-gated channel 15
NP_180393.1
  • cyclic nucleotide-gated channel 15 (CNGC15); FUNCTIONS IN: cyclic nucleotide binding, calmodulin binding, cation channel activity; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 14 (TAIR:AT2G24610.1); Has 3177 Blast hits to 3099 proteins in 290 species: Archae - 0; Bacteria - 161; Metazoa - 1483; Fungi - 19; Plants - 962; Viruses - 0; Other Eukaryotes - 552 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    12049443..12052643
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128386.2NP_180393.1  cyclic nucleotide-gated channel 15 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180393.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SL29
    UniProtKB/TrEMBL
    A0A178VZ07, A0A5S9X1Y1, A0A7G2ED22
    Conserved Domains (2) summary
    PLN03192
    Location:127489
    PLN03192; Voltage-dependent potassium channel; Provisional
    cd00038
    Location:471602
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
  2. NM_001336157.1NP_001324840.1  cyclic nucleotide-gated channel 15 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B1B6, A0A7G2ED22
External link. Please review our privacy policy.