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Iqcc IQ motif containing C [ Mus musculus (house mouse) ]

Gene ID: 230767, updated on 9-Dec-2024

Summary

Official Symbol
Iqccprovided by MGI
Official Full Name
IQ motif containing Cprovided by MGI
Primary source
MGI:MGI:2446212
See related
Ensembl:ENSMUSG00000040795 AllianceGenome:MGI:2446212
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Orthologous to human IQCC (IQ motif containing C). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 6.1), testis adult (RPKM 6.0) and 28 other tissues See more
Orthologs
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Genomic context

See Iqcc in Genome Data Viewer
Location:
4 D2.2; 4 63.26 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (129508919..129512969, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (129615617..129619093, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3, subunit I Neighboring gene transmembrane protein 234 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:129287304-129287568 Neighboring gene doublecortin domain containing 2b Neighboring gene STARR-positive B cell enhancer ABC_E10261 Neighboring gene coiled coil domain containing 28B Neighboring gene STARR-seq mESC enhancer starr_11504 Neighboring gene predicted gene, 34305 Neighboring gene taxilin alpha Neighboring gene STARR-positive B cell enhancer ABC_E1283

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Clone Names

  • MGC28034

Gene Ontology Provided by MGI

Component Evidence Code Pubs
is_active_in cellular_component  

General protein information

Preferred Names
IQ domain-containing protein C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001426288.1 → NP_001413217.1  IQ domain-containing protein C isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL671759
  2. NM_001426289.1 → NP_001413218.1  IQ domain-containing protein C isoform 3

    Status: VALIDATED

    Source sequence(s)
    AL671759
  3. NM_001426290.1 → NP_001413219.1  IQ domain-containing protein C isoform 3

    Status: VALIDATED

    Source sequence(s)
    AL671759
  4. NM_198026.3 → NP_932143.2  IQ domain-containing protein C isoform 1

    See identical proteins and their annotated locations for NP_932143.2

    Status: VALIDATED

    Source sequence(s)
    AL671759
    Consensus CDS
    CCDS38886.1
    UniProtKB/Swiss-Prot
    A2ADZ8, Q8K0F9, Q8R0F4
    Related
    ENSMUSP00000040584.6, ENSMUST00000046675.12

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    129508919..129512969 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036164054.1 → XP_036019947.1  IQ domain-containing protein C isoform X3

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