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    GR-RBP5 glycine-rich RNA-binding protein 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843763, updated on 18-Sep-2024

    Summary

    Official Symbol
    GR-RBP5
    Official Full Name
    glycine-rich RNA-binding protein 5
    Primary source
    TAIR:AT1G74230
    Locus tag
    AT1G74230
    See related
    Araport:AT1G74230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1O17.10; F1O17_10; glycine-rich RNA-binding protein 5
    Summary
    encodes a glycine-rich RNA binding protein.
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    Genomic context

    See GR-RBP5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (27914602..27917097)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene PLC-like phosphodiesterases superfamily protein Neighboring gene homeobox-like protein Neighboring gene Mitochondrial substrate carrier family protein Neighboring gene DNAJ heat shock N-terminal domain-containing protein

    General gene information

    NM_106083.5

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in cytosol PubMed 
    located_in mitochondrion PubMed 
    located_in mitochondrion PubMed 
    located_in nucleus  

    General protein information

    Preferred Names
    glycine-rich RNA-binding protein 5
    NP_177563.1
    • glycine-rich RNA-binding protein 5 (GR-RBP5); FUNCTIONS IN: RNA binding, copper ion binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 3 (TAIR:AT5G61030.1); Has 144 Blast hits to 144 proteins in 27 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27914602..27917097
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106083.5NP_177563.1  glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177563.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C909
      UniProtKB/TrEMBL
      A0A178WFE3
      Conserved Domains (1) summary
      cl17169
      Location:35109
      RRM_SF; RNA recognition motif (RRM) superfamily
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