U.S. flag

An official website of the United States government

HCF208 chaperone (DUF2930) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835287, updated on 18-Sep-2024

Summary

Official Symbol
HCF208
Official Full Name
chaperone (DUF2930)
Primary source
TAIR:AT5G52110
Locus tag
AT5G52110
See related
Araport:AT5G52110
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
CCB2; COFACTOR ASSEMBLY OF COMPLEX C; HIGH CHLOROPHYLL FLUORESCENCE 208; MSG15.21; MSG15_21
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See HCF208 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Sequence:
Chromosome: 5; NC_003076.8 (21171634..21174019, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene F-box associated ubiquitination effector family protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene ncRNA Neighboring gene Dihydrodipicolinate reductase, bacterial/plant Neighboring gene ribonuclease H superfamily polynucleotidyl transferase Neighboring gene phloem protein 2-A14

General gene information

NM_001036983.3
NM_124590.2

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in chloroplast PubMed 
located_in chloroplast  

General protein information

Preferred Names
chaperone (DUF2930)
NP_001032060.1
  • HIGH CHLOROPHYLL FLUORESCENCE 208 (HCF208); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2930 (InterPro:IPR021325); Has 125 Blast hits to 125 proteins in 55 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
NP_200024.1
  • HIGH CHLOROPHYLL FLUORESCENCE 208 (HCF208); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2930 (InterPro:IPR021325); Has 125 Blast hits to 125 proteins in 55 species: Archae - 0; Bacteria - 72; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21171634..21174019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001036983.3NP_001032060.1  chaperone (DUF2930) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001032060.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q67YA4, Q9FJ81
    UniProtKB/TrEMBL
    A0A178UEB1, A0A5S9YD87
    Conserved Domains (1) summary
    pfam11152
    Location:64273
    DUF2930; Protein of unknown function (DUF2930)
  2. NM_124590.2NP_200024.1  chaperone (DUF2930) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200024.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q67YA4, Q9FJ81
    UniProtKB/TrEMBL
    A0A178UEB1, A0A5S9YD87
    Conserved Domains (1) summary
    pfam11152
    Location:64273
    DUF2930; Protein of unknown function (DUF2930)
External link. Please review our privacy policy.