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    Vmn1r65 vomeronasal 1 receptor 65 [ Mus musculus (house mouse) ]

    Gene ID: 81013, updated on 27-Nov-2024

    Summary

    Official Symbol
    Vmn1r65provided by MGI
    Official Full Name
    vomeronasal 1 receptor 65provided by MGI
    Primary source
    MGI:MGI:3033475
    See related
    Ensembl:ENSMUSG00000066850 AllianceGenome:MGI:3033475
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V3R6; V1rd6
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Vmn1r65 in Genome Data Viewer
    Location:
    7 A1; 7 3.48 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (6010749..6014009, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (6007750..6011010, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor, pseudogene 45 Neighboring gene vomeronasal 1 receptor, pseudogene 46 Neighboring gene STARR-seq mESC enhancer starr_17963 Neighboring gene STARR-seq mESC enhancer starr_17964 Neighboring gene ribosomal protein S18 pseudogene Neighboring gene protein tyrosine phosphatase 4a1 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in cellular_component  

    General protein information

    Preferred Names
    vomeronasal 1 receptor, D6
    Names
    pheromone receptor V3R6
    vomeronasal 1 receptor Vmn1r65
    vomeronasal type 1 receptor D6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_030738.2 → NP_109663.1  vomeronasal 1 receptor, D6

      See identical proteins and their annotated locations for NP_109663.1

      Status: VALIDATED

      Source sequence(s)
      AC026949, AF324870
      Consensus CDS
      CCDS20767.1
      UniProtKB/TrEMBL
      F6MAZ4, F6MB03, F6MB06, F6MB13, Q9EPS7
      Related
      ENSMUSP00000083520.2, ENSMUST00000086338.2
      Conserved Domains (1) summary
      pfam03402
      Location:54 → 303
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      6010749..6014009 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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