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YSL4 YELLOW STRIPE like 4 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834102, updated on 18-Sep-2024

Summary

Official Symbol
YSL4
Official Full Name
YELLOW STRIPE like 4
Primary source
TAIR:AT5G41000
Locus tag
AT5G41000
See related
Araport:AT5G41000
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtYSL4; MEE6.7; MEE6_7; YELLOW STRIPE like 4
Summary
Arabidopsis thaliana metal-nicotianamine transporter YSL4
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Genomic context

See YSL4 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Sequence:
Chromosome: 5; NC_003076.8 (16420755..16423830)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DUF 3339) Neighboring gene uncharacterized protein Neighboring gene GDSL lipase 1 Neighboring gene ncRNA Neighboring gene DNA directed RNA polymerase, 7 kDa subunit Neighboring gene myb family transcription factor Neighboring gene uncharacterized protein

General gene information

NM_001344377.1
NM_001344378.1
NM_123465.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in chloroplast  
located_in plant-type vacuole PubMed 
located_in plant-type vacuole membrane PubMed 

General protein information

Preferred Names
YELLOW STRIPE like 4
NP_198916.2
  • YELLOW STRIPE like 4 (YSL4); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 6 (TAIR:AT3G27020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    16420755..16423830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123465.4NP_198916.2  YELLOW STRIPE like 4 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198916.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q6R3K8, Q9FLM9
    UniProtKB/TrEMBL
    A0A178UFR8, A0A7G2FCS2
    Conserved Domains (1) summary
    pfam03169
    Location:34654
    OPT; OPT oligopeptide transporter protein
  2. NM_001344377.1NP_001331152.1  YELLOW STRIPE like 4 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BD20, A0A7G2FCS2
  3. NM_001344378.1NP_001331151.1  YELLOW STRIPE like 4 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BD27
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