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Tmem184c transmembrane protein 184C [ Rattus norvegicus (Norway rat) ]

Gene ID: 291946, updated on 9-Dec-2024

Summary

Official Symbol
Tmem184cprovided by RGD
Official Full Name
transmembrane protein 184Cprovided by RGD
Primary source
RGD:727852
See related
EnsemblRapid:ENSRNOG00000012860 AllianceGenome:RGD:727852
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Tmem34
Summary
Predicted to enable transmembrane transporter activity. Predicted to be active in membrane. Orthologous to human TMEM184C (transmembrane protein 184C). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Biased expression in Testes (RPKM 165.9), Adrenal (RPKM 125.7) and 9 other tissues See more
Orthologs
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Genomic context

See Tmem184c in Genome Data Viewer
Location:
19q11
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 19 NC_086037.1 (47249403..47265502)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 19 NC_051354.1 (30345183..30361275)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 19 NC_005118.4 (34041128..34057165)

Chromosome 19 - NC_086037.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120098594 Neighboring gene endothelin receptor type A Neighboring gene uncharacterized LOC134483343 Neighboring gene protein arginine methyltransferase 9 Neighboring gene Rho GTPase activating protein 10 Neighboring gene uncharacterized LOC134483344 Neighboring gene membrane-associated progesterone receptor component 1 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Clone Names

  • MGC105290

Gene Ontology Provided by RGD

Component Evidence Code Pubs
is_active_in membrane  
located_in membrane  

General protein information

Preferred Names
transmembrane protein 184C
Names
DNA sequence AY228474
transmembrane protein 34

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_178330.1NP_847900.1  transmembrane protein 184C

    See identical proteins and their annotated locations for NP_847900.1

    Status: PROVISIONAL

    Source sequence(s)
    AY228474
    UniProtKB/Swiss-Prot
    Q810F5
    UniProtKB/TrEMBL
    A0A8I6AF90, A6IYK4
    Conserved Domains (1) summary
    pfam03619
    Location:48316
    Solute_trans_a; Organic solute transporter Ostalpha

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086037.1 Reference GRCr8

    Range
    47249403..47265502
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063277896.1XP_063133966.1  transmembrane protein 184C isoform X3

  2. XM_006255422.5XP_006255484.1  transmembrane protein 184C isoform X1

    UniProtKB/TrEMBL
    A0A8I6AF90, A0A8L2Q8K2
    Related
    ENSRNOP00000080369.2, ENSRNOT00000116349.2
    Conserved Domains (1) summary
    pfam03619
    Location:90358
    Solute_trans_a; Organic solute transporter Ostalpha
  3. XM_063277895.1XP_063133965.1  transmembrane protein 184C isoform X2

    UniProtKB/TrEMBL
    A0A8I5ZPW6, A0A8I6AF90
    Related
    ENSRNOP00000017225.6, ENSRNOT00000017226.8
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