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    Cyp2c55 cytochrome P450, family 2, subfamily c, polypeptide 55 [ Mus musculus (house mouse) ]

    Gene ID: 72082, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cyp2c55provided by MGI
    Official Full Name
    cytochrome P450, family 2, subfamily c, polypeptide 55provided by MGI
    Primary source
    MGI:MGI:1919332
    See related
    Ensembl:ENSMUSG00000025002 AllianceGenome:MGI:1919332
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CYPIIC55; 2010318C06Rik
    Summary
    Enables arachidonate epoxygenase activity and linoleic acid epoxygenase activity. Acts upstream of or within arachidonate metabolic process and linoleic acid metabolic process. Predicted to be located in plasma membrane. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Orthologous to human CYP2C18 (cytochrome P450 family 2 subfamily C member 18). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward colon adult (RPKM 170.4) See more
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    Genomic context

    See Cyp2c55 in Genome Data Viewer
    Location:
    19 C3; 19 33.64 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (38995384..39031134)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (39006940..39042690)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_46102 Neighboring gene helicase, lymphoid specific Neighboring gene cytochrome P450, family 2, subfamily c, polypeptide 52, pseudogene Neighboring gene STARR-seq mESC enhancer starr_46105 Neighboring gene STARR-seq mESC enhancer starr_46106 Neighboring gene CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 pseudogene Neighboring gene cytochrome P450, family 2, subfamily c, polypeptide 65

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in cytoplasm  
    located_in endoplasmic reticulum membrane  
    is_active_in intracellular membrane-bounded organelle  
    located_in intracellular membrane-bounded organelle  
    located_in plasma membrane  
    located_in plasma membrane  

    General protein information

    Preferred Names
    cytochrome P450 2C55
    Names
    cytochrome P450, 2c55
    NP_082365.1
    XP_006527418.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028089.3NP_082365.1  cytochrome P450 2C55

      See identical proteins and their annotated locations for NP_082365.1

      Status: PROVISIONAL

      Source sequence(s)
      AC100729
      Consensus CDS
      CCDS29790.1
      UniProtKB/Swiss-Prot
      Q9D816
      Related
      ENSMUSP00000025966.5, ENSMUST00000025966.5
      Conserved Domains (1) summary
      pfam00067
      Location:30485
      p450; Cytochrome P450

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      38995384..39031134
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006527355.2XP_006527418.1  cytochrome P450 2C55 isoform X1

      Conserved Domains (1) summary
      pfam00067
      Location:30387
      p450; Cytochrome P450
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