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4930554C24Rik RIKEN cDNA 4930554C24 gene [ Mus musculus (house mouse) ]

Gene ID: 75253, updated on 22-Oct-2024

Summary

Official Symbol
4930554C24Rikprovided by MGI
Official Full Name
RIKEN cDNA 4930554C24 geneprovided by MGI
Primary source
MGI:MGI:1922503
See related
Ensembl:ENSMUSG00000099724 AllianceGenome:MGI:1922503
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

See 4930554C24Rik in Genome Data Viewer
Location:
9; 9 E3.1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (84656451..84666404)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (84774398..84784351)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 39388 Neighboring gene predicted gene, 26126 Neighboring gene predicted gene, 36366 Neighboring gene STARR-seq mESC enhancer starr_24811 Neighboring gene STARR-seq mESC enhancer starr_24812 Neighboring gene STARR-seq mESC enhancer starr_24814 Neighboring gene STARR-seq mESC enhancer starr_24816 Neighboring gene STARR-seq mESC enhancer starr_24817 Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 pseudogene Neighboring gene STARR-seq mESC enhancer starr_24818 Neighboring gene terminal nucleotidyltransferase 5A

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Component Evidence Code Pubs
is_active_in cellular_component  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040739.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC109212, AK016115
    Related
    ENSMUST00000187735.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    84656451..84666404
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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