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Nrep neuronal regeneration related protein [ Rattus norvegicus (Norway rat) ]

Gene ID: 338475, updated on 9-Dec-2024

Summary

Official Symbol
Nrepprovided by RGD
Official Full Name
neuronal regeneration related proteinprovided by RGD
Primary source
RGD:631411
See related
EnsemblRapid:ENSRNOG00000068914 AllianceGenome:RGD:631411
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
P311
Summary
Involved in axon regeneration and regulation of neuron differentiation. Predicted to be located in cytoplasm. Orthologous to human NREP (neuronal regeneration related protein). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Biased expression in Muscle (RPKM 596.9), Brain (RPKM 471.1) and 8 other tissues See more
Orthologs
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Genomic context

See Nrep in Genome Data Viewer
Location:
18p12
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 18 NC_086036.1 (25291219..25320742, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 18 NC_051353.1 (25017069..25046593, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 18 NC_005117.4 (26183753..26212796, complement)

Chromosome 18 - NC_086036.1Genomic Context describing neighboring genes Neighboring gene calcium/calmodulin-dependent protein kinase IV Neighboring gene uncharacterized LOC134482925 Neighboring gene StAR-related lipid transfer domain containing 4 Neighboring gene uncharacterized LOC102549443 Neighboring gene uncharacterized LOC120098267 Neighboring gene uncharacterized LOC120098268

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in cytoplasm  

General protein information

Preferred Names
neuronal regeneration-related protein
Names
neuronal protein 3.1
protein p311

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001419560.1NP_001406489.1  neuronal regeneration-related protein

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000018
    UniProtKB/Swiss-Prot
    Q80Z34
    UniProtKB/TrEMBL
    A6J2S2
    Related
    ENSRNOP00000086813.1, ENSRNOT00000119499.2
  2. NM_001419561.1NP_001406490.1  neuronal regeneration-related protein

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000018
    UniProtKB/Swiss-Prot
    Q80Z34
    UniProtKB/TrEMBL
    A6J2S2

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086036.1 Reference GRCr8

    Range
    25291219..25320742 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063277456.1XP_063133526.1  neuronal regeneration-related protein isoform X1

    UniProtKB/Swiss-Prot
    Q80Z34
    UniProtKB/TrEMBL
    A6J2S2
  2. XM_063277457.1XP_063133527.1  neuronal regeneration-related protein isoform X1

    UniProtKB/Swiss-Prot
    Q80Z34
    UniProtKB/TrEMBL
    A6J2S2
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