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Fam184a family with sequence similarity 184, member A [ Mus musculus (house mouse) ]

Gene ID: 75906, updated on 9-Dec-2024

Summary

Official Symbol
Fam184aprovided by MGI
Official Full Name
family with sequence similarity 184, member Aprovided by MGI
Primary source
MGI:MGI:1923156
See related
Ensembl:ENSMUSG00000019856 AllianceGenome:MGI:1923156
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
3110012E06Rik; 4930438C08Rik; 4930589M24Rik
Summary
Predicted to be located in P-body and centriolar satellite. Is expressed in genitourinary system; medulla oblongata; midbrain; midbrain mantle layer; and pons. Orthologous to human FAM184A (family with sequence similarity 184 member A). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Biased expression in frontal lobe adult (RPKM 8.0), testis adult (RPKM 5.7) and 11 other tissues See more
Orthologs
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Genomic context

See Fam184a in Genome Data Viewer
Location:
10 B3; 10 27.26 cM
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (53509131..53627368, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (53633035..53751277, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_26696 Neighboring gene STARR-seq mESC enhancer starr_26698 Neighboring gene predicted gene, 40650 Neighboring gene predicted gene, 20597 Neighboring gene STARR-seq mESC enhancer starr_26699 Neighboring gene STARR-positive B cell enhancer ABC_E6844 Neighboring gene minichromosome maintenance 9 homologous recombination repair factor Neighboring gene STARR-positive B cell enhancer ABC_E10606 Neighboring gene CapStarr-seq enhancer MGSCv37_chr10:53349966-53350075 Neighboring gene anti-silencing function 1A histone chaperone Neighboring gene mannosidase 1, alpha Neighboring gene STARR-positive B cell enhancer mm9_chr10:53704763-53705064 Neighboring gene STARR-positive B cell enhancer ABC_E6845 Neighboring gene STARR-positive B cell enhancer mm9_chr10:53735714-53736015 Neighboring gene predicted gene, 53584 Neighboring gene STARR-positive B cell enhancer mm9_chr10:53795485-53795786 Neighboring gene predicted gene, 16998

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

General gene information

Gene Ontology Provided by MGI

Component Evidence Code Pubs
located_in P-body  
located_in centriolar satellite  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081428.2NP_001074897.1  protein FAM184A

    Status: VALIDATED

    Source sequence(s)
    AC153949, AC164581
    Consensus CDS
    CCDS35901.1
    UniProtKB/TrEMBL
    E9PW83, F6TU77
    Related
    ENSMUSP00000020003.8, ENSMUST00000020003.15
    Conserved Domains (2) summary
    TIGR02168
    Location:2281005
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    53509131..53627368 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036156072.1XP_036011965.1  protein FAM184A isoform X17

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (2) summary
    COG1196
    Location:63705
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  2. XM_017314135.3XP_017169624.1  protein FAM184A isoform X9

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (2) summary
    TIGR02168
    Location:2631019
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  3. XM_006512897.5XP_006512960.1  protein FAM184A isoform X14

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (2) summary
    TIGR02168
    Location:2631019
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  4. XM_030245348.2XP_030101208.1  protein FAM184A isoform X15

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (2) summary
    TIGR02168
    Location:2281005
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  5. XM_006512893.5XP_006512956.1  protein FAM184A isoform X5

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (2) summary
    COG1196
    Location:1631002
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  6. XM_006512890.5XP_006512953.1  protein FAM184A isoform X2

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (2) summary
    TIGR02168
    Location:2631019
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  7. XM_006512894.5XP_006512957.1  protein FAM184A isoform X6

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (2) summary
    COG1196
    Location:163988
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  8. XM_017314134.3XP_017169623.1  protein FAM184A isoform X7

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (3) summary
    COG1196
    Location:46705
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:737992
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  9. XM_006512889.5XP_006512952.1  protein FAM184A isoform X1

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (2) summary
    TIGR02168
    Location:2631019
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  10. XM_011243225.4XP_011241527.1  protein FAM184A isoform X10

    UniProtKB/TrEMBL
    F6TU77
    Related
    ENSMUSP00000127400.2, ENSMUST00000163761.8
    Conserved Domains (3) summary
    COG1196
    Location:46704
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:611978
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  11. XM_030245350.2XP_030101210.1  protein FAM184A isoform X21

    Conserved Domains (2) summary
    COG1196
    Location:47313
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:127515
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
  12. XM_006512898.5XP_006512961.1  protein FAM184A isoform X18

    UniProtKB/TrEMBL
    F6RSY8
    Conserved Domains (2) summary
    TIGR02168
    Location:46628
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    TIGR02169
    Location:127331
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
  13. XM_030245349.2XP_030101209.1  protein FAM184A isoform X19

    UniProtKB/TrEMBL
    F6RSY8
    Related
    ENSMUSP00000130315.2, ENSMUST00000171807.8
    Conserved Domains (1) summary
    COG1196
    Location:258646
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
  14. XM_006512891.5XP_006512954.1  protein FAM184A isoform X3

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (2) summary
    TIGR02168
    Location:2631019
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  15. XM_017314133.3XP_017169622.1  protein FAM184A isoform X4

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (2) summary
    TIGR02168
    Location:2281005
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  16. XM_036156073.1XP_036011966.1  protein FAM184A isoform X20

    UniProtKB/TrEMBL
    F6RSY8
    Conserved Domains (1) summary
    COG1196
    Location:47313
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
  17. XM_017314136.3XP_017169625.1  protein FAM184A isoform X12

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (2) summary
    TIGR02168
    Location:2281005
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  18. XM_006512896.5XP_006512959.1  protein FAM184A isoform X13

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (2) summary
    TIGR02168
    Location:2631019
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  19. XM_006512895.5XP_006512958.1  protein FAM184A isoform X8

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (2) summary
    TIGR02168
    Location:2631019
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  20. XM_036156071.1XP_036011964.1  protein FAM184A isoform X16

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (2) summary
    COG1196
    Location:163988
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B
  21. XM_030245346.2XP_030101206.1  protein FAM184A isoform X11

    UniProtKB/TrEMBL
    F6TU77
    Conserved Domains (2) summary
    TIGR02168
    Location:2281005
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15665
    Location:57267
    FAM184; Family with sequence similarity 184, A and B

RNA

  1. XR_003948817.2 RNA Sequence

  2. XR_380088.5 RNA Sequence

  3. XR_004936297.1 RNA Sequence

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