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Select item 68680371.

Nitrogen Fertilizer Amendment Alter the Bacterial Community Structure in the Rhizosphere of Rice (Oryza sativa L.) and Improve Crop Yield

Jun Chen, Yasir Arafat, Israr Ud Din, Bo Yang, Liuting Zhou, Juanying Wang, Puleng Letuma, Hongmiao Wu, Xianjin Qin, Linkun Wu, Sheng Lin, Zhixing Zhang, Wenxiong Lin

Front Microbiol. 2019; 10: 2623. Published online 2019 Nov 14. doi: 10.3389/fmicb.2019.02623

PMCID:: PMC6868037

Abstract Article PDF–2.0M

Select item 65816732.

Phenomics and Genomics Reveal Adaptation of Virgibacillus dokdonensis Strain 21D to Its Origin of Isolation, the Seawater-Brine Interface of the Mediterranean Sea Deep Hypersaline Anoxic Basin Discovery

Zahraa Zeaiter, Ramona Marasco, Jenny M. Booth, Erica M. Prosdocimi, Francesca Mapelli, Matteo Callegari, Marco Fusi, Grégoire Michoud, Francesco Molinari, Daniele Daffonchio, Sara Borin, Elena Crotti

Front Microbiol. 2019; 10: 1304. Published online 2019 Jun 12. doi: 10.3389/fmicb.2019.01304

PMCID:: PMC6581673

Abstract Article PDF–2.3M

Select item 64917313.

Sulfate-Reducing Bacteria That Produce Exopolymers Thrive in the Calcifying Zone of a Hypersaline Cyanobacterial Mat

Stefan Spring, Dimitry Y. Sorokin, Susanne Verbarg, Manfred Rohde, Tanja Woyke, Nikos C. Kyrpides

Front Microbiol. 2019; 10: 862. Published online 2019 Apr 24. doi: 10.3389/fmicb.2019.00862

PMCID:: PMC6491731

Abstract Article PDF–2.8M

Select item 60854374.

Origin and Evolution of Flavin-Based Electron Bifurcating Enzymes

Saroj Poudel, Eric C. Dunham, Melody R. Lindsay, Maximiliano J. Amenabar, Elizabeth M. Fones, Daniel R. Colman, Eric S. Boyd

Front Microbiol. 2018; 9: 1762. Published online 2018 Aug 3. doi: 10.3389/fmicb.2018.01762

PMCID:: PMC6085437

Abstract Article PDF–3.4M

Select item 58402165.

Sulfate Transporters in Dissimilatory Sulfate Reducing Microorganisms: A Comparative Genomics Analysis

Angeliki Marietou, Hans Røy, Bo B. Jørgensen, Kasper U. Kjeldsen

Front Microbiol. 2018; 9: 309. Published online 2018 Mar 2. doi: 10.3389/fmicb.2018.00309

PMCID:: PMC5840216

Abstract Article PDF–6.5M

Select item 56624426.

The genome of the Gram-positive metal- and sulfate-reducing bacterium Desulfotomaculum reducens strain MI-1

Pilar Junier, Thomas Junier, Sheila Podell, David R. Sims, John C. Detter, Athanasios Lykidis, Cliff S. Han, Nicholas S. Wigginton, Terry Gaasterland, Rizlan Bernier-Latmani

Environ Microbiol. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Environ Microbiol. 2010 Oct; 12(10): 2738–2754. doi: 10.1111/j.1462-2920.2010.02242.x

PMCID:: PMC5662442

Abstract Article PDF–2.9M

Select item 53984957.

AS3MT-mediated tolerance to arsenic evolved by multiple independent horizontal gene transfers from bacteria to eukaryotes

Michael Palmgren, Karin Engström, Björn M. Hallström, Karin Wahlberg, Dan Ariel Søndergaard, Torbjörn Säll, Marie Vahter, Karin Broberg

PLoS One. 2017; 12(4): e0175422. Published online 2017 Apr 20. doi: 10.1371/journal.pone.0175422

PMCID:: PMC5398495

Abstract Article PDF–4.3M

Select item 53680688.

A novel signal transduction protein: Combination of solute binding and tandem PAS‐like sensor domains in one polypeptide chain

R. Wu, R. Wilton, M. E. Cuff, M. Endres, G. Babnigg, J. N. Edirisinghe, C. S. Henry, A. Joachimiak, M. Schiffer, P. R. Pokkuluri

Protein Sci. 2017 Apr; 26(4): 857–869. Published online 2017 Mar 6. doi: 10.1002/pro.3134

PMCID:: PMC5368068

Abstract Article PDF–2.5M

Select item 52816259.

Metabolomic and Metagenomic Analysis of Two Crude Oil Production Pipelines Experiencing Differential Rates of Corrosion

Vincent Bonifay, Boris Wawrik, Jan Sunner, Emily C. Snodgrass, Egemen Aydin, Kathleen E. Duncan, Amy V. Callaghan, Athenia Oldham, Turid Liengen, Iwona Beech

Front Microbiol. 2017; 8: 99. Published online 2017 Jan 31. doi: 10.3389/fmicb.2017.00099

PMCID:: PMC5281625

Abstract Article PDF–2.6M

Select item 499301410.

Phylogeography, Salinity Adaptations and Metabolic Potential of the Candidate Division KB1 Bacteria Based on a Partial Single Cell Genome

Lisa M. Nigro, Andrew S. Hyde, Barbara J. MacGregor, Andreas Teske

Front Microbiol. 2016; 7: 1266. Published online 2016 Aug 22. doi: 10.3389/fmicb.2016.01266

PMCID:: PMC4993014

Abstract Article PDF–2.6M

Select item 476583811.

Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus

Gaurav Sharma, Tarun Narwani, Srikrishna Subramanian

PLoS One. 2016; 11(2): e0148593. Published online 2016 Feb 22. doi: 10.1371/journal.pone.0148593

PMCID:: PMC4765838

Abstract Article PDF–9.1M

Select item 472030612.

Mechanistic insights into c-di-GMP–dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa

Bruno Y. Matsuyama, Petya V. Krasteva, Claudine Baraquet, Caroline S. Harwood, Holger Sondermann, Marcos V. A. S. Navarro

Proc Natl Acad Sci U S A. 2016 Jan 12; 113(2): E209–E218. Published online 2015 Dec 28. doi: 10.1073/pnas.1523148113

PMCID:: PMC4720306

Abstract Article PDF–2.0M

Select item 468661113.

Key Factors Influencing Rates of Heterotrophic Sulfate Reduction in Active Seafloor Hydrothermal Massive Sulfide Deposits

Kiana L. Frank, Karyn L. Rogers, Daniel R. Rogers, David T. Johnston, Peter R. Girguis

Front Microbiol. 2015; 6: 1449. Published online 2015 Dec 22. doi: 10.3389/fmicb.2015.01449

PMCID:: PMC4686611

Abstract Article PDF–2.5M

Select item 423713414.

Going from microbial ecology to genome data and back: studies on a haloalkaliphilic bacterium isolated from Soap Lake, Washington State

Melanie R. Mormile

Front Microbiol. 2014; 5: 628. Prepublished online 2014 Oct 10. Published online 2014 Nov 19. doi: 10.3389/fmicb.2014.00628

PMCID:: PMC4237134

Abstract Article PDF–2.0M

Select item 392760715.

Annotation of Protein Domains Reveals Remarkable Conservation in the Functional Make up of Proteomes Across Superkingdoms

Arshan Nasir, Aisha Naeem, Muhammad Jawad Khan, Horacio D. Lopez-Nicora, Gustavo Caetano-Anollés

Genes (Basel) 2011 Dec; 2(4): 869–911. Published online 2011 Nov 8. doi: 10.3390/genes2040869

PMCID:: PMC3927607

Abstract Article PDF–2.0M

Select item 391760316.

Bioinformatic Characterization of the 4-Toluene Sulfonate Uptake Permease (TSUP) Family of Transmembrane Proteins

Maksim A. Shlykov, Wei Hao Zheng, Jonathan S. Chen, Milton H. Saier, Jr.

Biochim Biophys Acta. Author manuscript; available in PMC 2014 Feb 7.

Published in final edited form as: Biochim Biophys Acta. 2012 Mar; 1818(3): 703–717. Published online 2011 Dec 13. doi: 10.1016/j.bbamem.2011.12.005

PMCID:: PMC3917603

Abstract Article PDF–3.0M

Select item 380747817.

New Family of Tungstate-Responsive Transcriptional Regulators in Sulfate-Reducing Bacteria

Alexey E. Kazakov, Lara Rajeev, Eric G. Luning, Grant M. Zane, Kavya Siddartha, Dmitry A. Rodionov, Inna Dubchak, Adam P. Arkin, Judy D. Wall, Aindrila Mukhopadhyay, Pavel S. Novichkov

J Bacteriol. 2013 Oct; 195(19): 4466–4475. doi: 10.1128/JB.00679-13

PMCID:: PMC3807478

Abstract Article PDF–993K

Select item 357132918.

Variation among Desulfovibrio Species in Electron Transfer Systems Used for Syntrophic Growth

Birte Meyer, Jennifer Kuehl, Adam M. Deutschbauer, Morgan N. Price, Adam P. Arkin, David A. Stahl

J Bacteriol. 2013 Mar; 195(5): 990–1004. doi: 10.1128/JB.01959-12

PMCID:: PMC3571329

Abstract Article PDF–2.1M

Select item 353617219.

Transcription Factor Family-Based Reconstruction of Singleton Regulons and Study of the Crp/Fnr, ArsR, and GntR Families in Desulfovibrionales Genomes

Alexey E. Kazakov, Dmitry A. Rodionov, Morgan N. Price, Adam P. Arkin, Inna Dubchak, Pavel S. Novichkov

J Bacteriol. 2013 Jan; 195(1): 29–38. doi: 10.1128/JB.01977-12

PMCID:: PMC3536172

Abstract Article PDF–1.1M

Select item 353465720.

Genomic Analysis of Melioribacter roseus, Facultatively Anaerobic Organotrophic Bacterium Representing a Novel Deep Lineage within Bacteriodetes/Chlorobi Group

Vitaly V. Kadnikov, Andrey V. Mardanov, Olga A. Podosokorskaya, Sergey N. Gavrilov, Ilya V. Kublanov, Alexey V. Beletsky, Elizaveta A. Bonch-Osmolovskaya, Nikolai V. Ravin

PLoS One. 2013; 8(1): e53047. Published online 2013 Jan 2. doi: 10.1371/journal.pone.0053047