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Items: 1 to 20 of 81

1.
Host-Microbe Interactions in the Chemosynthetic Riftia pachyptila Symbiosis
Tjorven Hinzke, Manuel Kleiner, Corinna Breusing, Horst Felbeck, Robert Häsler, Stefan M. Sievert, Rabea Schlüter, Philip Rosenstiel, Thorsten B. H. Reusch, Thomas Schweder, Stephanie Markert
mBio. 2019 Nov-Dec; 10(6): e02243-19. Published online 2019 Dec 17. doi: 10.1128/mBio.02243-19
PMCID:
PMC6918071
ArticlePDF–3.8M
2.
Comparative Genomic Analysis Reveals Novel Microcompartment-Associated Metabolic Pathways in the Human Gut Microbiome
Dmitry A. Ravcheev, Lubin Moussu, Semra Smajic, Ines Thiele
Front Genet. 2019; 10: 636. Published online 2019 Jul 4. doi: 10.3389/fgene.2019.00636
PMCID:
PMC6620236
ArticlePDF–4.3M
3.
Comparative Genomic Analysis of the Regulation of Aromatic Metabolism in Betaproteobacteria
Inna A. Suvorova, Mikhail S. Gelfand
Front Microbiol. 2019; 10: 642. Published online 2019 Mar 29. doi: 10.3389/fmicb.2019.00642
PMCID:
PMC6449761
ArticlePDF–5.1M
4.
Development and Optimization of Metagenomic Next-Generation Sequencing Methods for Cerebrospinal Fluid Diagnostics
Patricia J. Simner, Heather B. Miller, Florian P. Breitwieser, Gabriel Pinilla Monsalve, Carlos A. Pardo, Steven L. Salzberg, Cynthia L. Sears, David L. Thomas, Charles G. Eberhart, Karen C. Carroll
J Clin Microbiol. 2018 Sep; 56(9): e00472-18. Prepublished online 2018 Jul 5. Published online 2018 Aug 27. doi: 10.1128/JCM.00472-18
PMCID:
PMC6113476
ArticlePDF–1.2M
5.
Tripartite ATP-Independent Periplasmic (TRAP) Transporters and Tripartite Tricarboxylate Transporters (TTT): From Uptake to Pathogenicity
Leonardo T. Rosa, Matheus E. Bianconi, Gavin H. Thomas, David J. Kelly
Front Cell Infect Microbiol. 2018; 8: 33. Published online 2018 Feb 12. doi: 10.3389/fcimb.2018.00033
PMCID:
PMC5812351
ArticlePDF–3.2M
6.
Identification of sRNA mediated responses to nutrient depletion in Burkholderia pseudomallei
Hirzahida Mohd-Padil, Nadzirah Damiri, Suhaila Sulaiman, Shiao-Fei Chai, Sheila Nathan, Mohd Firdaus-Raih
Sci Rep. 2017; 7: 17173. Published online 2017 Dec 7. doi: 10.1038/s41598-017-17356-4
PMCID:
PMC5719362
ArticlePDF–2.4M
7.
Metagenomic analysis of the complex microbial consortium associated with cultures of the oil‐rich alga Botryococcus braunii
Christine Sambles, Karen Moore, Thomas M. Lux, Katy Jones, George R. Littlejohn, João D. Gouveia, Stephen J. Aves, David J. Studholme, Rob Lee, John Love
Microbiologyopen. 2017 Aug; 6(4): e00482. Published online 2017 Jun 28. doi: 10.1002/mbo3.482
PMCID:
PMC5552944
ArticlePDF–836K
8.
Mining of Microbial Genomes for the Novel Sources of Nitrilases
Nikhil Sharma, Neerja Thakur, Tilak Raj, Savitri, Tek Chand Bhalla
Biomed Res Int. 2017; 2017: 7039245. Published online 2017 Apr 12. doi: 10.1155/2017/7039245
PMCID:
PMC5405348
ArticlePDF–700K
9.
Substrate and Cofactor Range Differences of Two Cysteine Dioxygenases from Ralstonia eutropha H16
Leonie Wenning, Nadine Stöveken, Jan Hendrik Wübbeler, Alexander Steinbüchel
Appl Environ Microbiol. 2016 Feb 1; 82(3): 910–921. Prepublished online 2015 Nov 20. Published online 2016 Jan 22. doi: 10.1128/AEM.02568-15
PMCID:
PMC4725276
ArticlePDF–1.2M
10.
Metabolic Pathway Involved in 2-Methyl-6-Ethylaniline Degradation by Sphingobium sp. Strain MEA3-1 and Cloning of the Novel Flavin-Dependent Monooxygenase System meaBA
Weiliang Dong, Qiongzhen Chen, Ying Hou, Shuhuan Li, Kai Zhuang, Fei Huang, Jie Zhou, Zhoukun Li, Jue Wang, Lei Fu, Zhengguang Zhang, Yan Huang, Fei Wang, Zhongli Cui
Appl Environ Microbiol. 2015 Dec; 81(24): 8254–8264. Prepublished online 2015 Sep 18. Published online 2015 Nov 13. doi: 10.1128/AEM.01883-15
PMCID:
PMC4644664
ArticlePDF–1.3M
11.
Human seroreactivity to gut microbiota antigens
Benjamin S. Christmann, Thomas R. Abrahamsson, Charles N. Bernstein, L. Wayne Duck, Peter J. Mannon, Göran Berg, Bengt Björkstén, Maria C. Jenmalm, Charles O. Elson
J Allergy Clin Immunol. Author manuscript; available in PMC 2016 Nov 1.
Published in final edited form as: J Allergy Clin Immunol. 2015 Nov; 136(5): 1378–1386.e5. Published online 2015 May 23. doi: 10.1016/j.jaci.2015.03.036
PMCID:
PMC4640988
ArticlePDF–1.7M
12.
Azotobacter Genomes: The Genome of Azotobacter chroococcum NCIMB 8003 (ATCC 4412)
Robert L. Robson, Robert Jones, R. Moyra Robson, Ariel Schwartz, Toby H. Richardson
PLoS One. 2015; 10(6): e0127997. Published online 2015 Jun 10. doi: 10.1371/journal.pone.0127997
PMCID:
PMC4465626
ArticlePDF–1.6M
13.
Experimental Strategies for Functional Annotation and Metabolism Discovery: Targeted Screening of Solute Binding Proteins and Unbiased Panning of Metabolomes
Matthew W. Vetting, Nawar Al-Obaidi, Suwen Zhao, Brian San Francisco, Jungwook Kim, Daniel J. Wichelecki, Jason T. Bouvier, Jose O. Solbiati, Hoan Vu, Xinshuai Zhang, Dmitry A. Rodionov, James D. Love, Brandan S. Hillerich, Ronald D. Seidel, Ronald J. Quinn, Andrei L. Osterman, John E. Cronan, Matthew P. Jacobson, John A. Gerlt, Steven C. Almo
Biochemistry. 2015 Jan 27; 54(3): 909–931. Published online 2014 Dec 25. doi: 10.1021/bi501388y
PMCID:
PMC4310620
ArticlePDF–9.4M
14.
AromaDeg, a novel database for phylogenomics of aerobic bacterial degradation of aromatics
Márcia Duarte, Ruy Jauregui, Ramiro Vilchez-Vargas, Howard Junca, Dietmar H. Pieper
Database (Oxford) 2014; 2014: bau118. Published online 2014 Dec 1. doi: 10.1093/database/bau118
PMCID:
PMC4250580
ArticlePDF–1.1M
15.
Earthworm symbiont Verminephrobacter eiseniae mediates natural transformation within host egg capsules using type IV pili
Seana K. Davidson, Glenn F. Dulla, Ruth A. Go, David A. Stahl, Nicolás Pinel
Front Microbiol. 2014; 5: 546. Published online 2014 Oct 29. doi: 10.3389/fmicb.2014.00546
PMCID:
PMC4212676
ArticlePDF–1.1M
16.
Comparative analysis of the Geobacillus hemicellulose utilization locus reveals a highly variable target for improved hemicellulolysis
Pieter De Maayer, Phillip J Brumm, David A Mead, Don A Cowan
BMC Genomics. 2014; 15(1): 836. Published online 2014 Oct 1. doi: 10.1186/1471-2164-15-836
PMCID:
PMC4194401
ArticlePDF–1.6M
17.
Genomic analysis reveals key aspects of prokaryotic symbiosis in the phototrophic consortium “Chlorochromatium aggregatum”
Zhenfeng Liu, Johannes Müller, Tao Li, Richard M Alvey, Kajetan Vogl, Niels-Ulrik Frigaard, Nathan C Rockwell, Eric S Boyd, Lynn P Tomsho, Stephan C Schuster, Petra Henke, Manfred Rohde, Jörg Overmann, Donald A Bryant
Genome Biol. 2013; 14(11): R127. Published online 2013 Nov 22. doi: 10.1186/gb-2013-14-11-r127
PMCID:
PMC4053972
ArticlePDF–2.0M
18.
Discovery of a Novel l-Lyxonate Degradation Pathway in Pseudomonas aeruginosa PAO1
Salehe Ghasempur, Subramaniam Eswaramoorthy, Brandan S. Hillerich, Ronald D. Seidel, Subramanyam Swaminathan, Steven C. Almo, John A. Gerlt
Biochemistry. 2014 May 27; 53(20): 3357–3366. Published online 2014 May 6. doi: 10.1021/bi5004298
PMCID:
PMC4038344
ArticlePDF–4.1M
19.
The earthworm—Verminephrobacter symbiosis: an emerging experimental system to study extracellular symbiosis
Marie B. Lund, Kasper U. Kjeldsen, Andreas Schramm
Front Microbiol. 2014; 5: 128. Published online 2014 Mar 28. doi: 10.3389/fmicb.2014.00128
PMCID:
PMC3975124
ArticlePDF–870K
20.
Genomic Evidence Reveals the Extreme Diversity and Wide Distribution of the Arsenic-Related Genes in Burkholderiales
Xiangyang Li, Linshuang Zhang, Gejiao Wang
PLoS One. 2014; 9(3): e92236. Published online 2014 Mar 14. doi: 10.1371/journal.pone.0092236
PMCID:
PMC3954881
ArticlePDF–1.4M

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