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Links from Taxonomy

Items: 1 to 20 of 48

1.
A new family of uncultivated bacteria involved in methanogenesis from the ubiquitous osmolyte glycine betaine in coastal saltmarsh sediments
Helen J. Jones, Eileen Kröber, Jason Stephenson, Michaela A. Mausz, Eleanor Jameson, Andrew Millard, Kevin J. Purdy, Yin Chen
Microbiome. 2019; 7: 120. Published online 2019 Aug 27. doi: 10.1186/s40168-019-0732-4
PMCID:
PMC6716910
AbstractArticlePDF–2.2M
2.
DNA and RNA interference mechanisms by CRISPR-Cas surveillance complexes
André Plagens, Hagen Richter, Emmanuelle Charpentier, Lennart Randau
FEMS Microbiol Rev. 2015 May 1; 39(3): 442–463. Published online 2015 Apr 30. doi: 10.1093/femsre/fuv019
PMCID:
PMC5965380
AbstractArticlePDF–2.7M
3.
Methane-yielding microbial communities processing lactate-rich substrates: a piece of the anaerobic digestion puzzle
Anna Detman, Damian Mielecki, Łukasz Pleśniak, Michał Bucha, Marek Janiga, Irena Matyasik, Aleksandra Chojnacka, Mariusz-Orion Jędrysek, Mieczysław K. Błaszczyk, Anna Sikora
Biotechnol Biofuels. 2018; 11: 116. Published online 2018 Apr 21. doi: 10.1186/s13068-018-1106-z
PMCID:
PMC5910564
AbstractArticlePDF–1.9M
4.
Forward genetics screen coupled with whole-genome resequencing identifies novel gene targets for improving heterologous enzyme production in Aspergillus niger
Morgann C. Reilly, Joonhoon Kim, Jed Lynn, Blake A. Simmons, John M. Gladden, Jon K. Magnuson, Scott E. Baker
Appl Microbiol Biotechnol. 2018; 102(4): 1797–1807. Published online 2018 Jan 6. doi: 10.1007/s00253-017-8717-3
PMCID:
PMC5794824
AbstractArticlePDF–662K
5.
A Molecular Arms Race: New Insights into anti-CRISPR mechanisms
John Mallon, Scott Bailey
Nat Struct Mol Biol. Author manuscript; available in PMC 2017 Sep 6.
Published in final edited form as: Nat Struct Mol Biol. 2016 Sep 6; 23(9): 765–766. doi: 10.1038/nsmb.3287
PMCID:
PMC5539770
AbstractArticlePDF–142K
6.
Conserved intergenic sequences revealed by CTAG-profiling in Salmonella: thermodynamic modeling for function prediction
Le Tang, Songling Zhu, Emilio Mastriani, Xin Fang, Yu-Jie Zhou, Yong-Guo Li, Randal N. Johnston, Zheng Guo, Gui-Rong Liu, Shu-Lin Liu
Sci Rep. 2017; 7: 43565. Published online 2017 Mar 6. doi: 10.1038/srep43565
PMCID:
PMC5337935
AbstractArticlePDF–923K
7.
Mechanism and Distribution of glmS Ribozymes
Phillip J. McCown, Wade C. Winkler, Ronald R. Breaker
Methods Mol Biol. Author manuscript; available in PMC 2017 Feb 17.
Published in final edited form as: Methods Mol Biol. 2012; 848: 113–129. doi: 10.1007/978-1-61779-545-9_8
PMCID:
PMC5315370
AbstractArticlePDF–764K
8.
The Complete Genome Sequence of Hyperthermophile Dictyoglomus turgidum DSM 6724™ Reveals a Specialized Carbohydrate Fermentor
Phillip J. Brumm, Krishne Gowda, Frank T. Robb, David A. Mead
Front Microbiol. 2016; 7: 1979. Published online 2016 Dec 20. doi: 10.3389/fmicb.2016.01979
PMCID:
PMC5167688
AbstractArticlePDF–2.4M
9.
A CRISPR evolutionary arms race: structural insights into viral anti-CRISPR/Cas responses
Jiuyu Wang, Jun Ma, Zhi Cheng, Xu Meng, Lilan You, Min Wang, Xinzheng Zhang, Yanli Wang
Cell Res. 2016 Oct; 26(10): 1165–1168. Published online 2016 Sep 2. doi: 10.1038/cr.2016.103
PMCID:
PMC5113301
ArticlePDF–2.4M
10.
Characterization of a Highly Thermostable and Organic Solvent-Tolerant Copper-Containing Polyphenol Oxidase with Dye-Decolorizing Ability from Kurthia huakuii LAM0618T
Xiang Guo, Shan Zhou, Yanwei Wang, Jinlong Song, Huimin Wang, Delong Kong, Jie Zhu, Weiwei Dong, Mingxiong He, Guoquan Hu, Zhiyong Ruan
PLoS One. 2016; 11(10): e0164810. Published online 2016 Oct 14. doi: 10.1371/journal.pone.0164810
PMCID:
PMC5065135
AbstractArticlePDF–2.6M
11.
Gene Repression in Haloarchaea Using the CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats)-Cas I-B System
Aris-Edda Stachler, Anita Marchfelder
J Biol Chem. 2016 Jul 15; 291(29): 15226–15242. Published online 2016 May 16. doi: 10.1074/jbc.M116.724062
PMCID:
PMC4946936
AbstractArticlePDF–3.3M
12.
Genome sequence of the organohalide-respiring Dehalogenimonas alkenigignens type strain (IP3-3T)
Trent A. Key, Dray P. Richmond, Kimberly S. Bowman, Yong-Joon Cho, Jongsik Chun, Milton S. da Costa, Fred A. Rainey, William M. Moe
Stand Genomic Sci. 2016; 11: 44. Published online 2016 Jun 23. doi: 10.1186/s40793-016-0165-7
PMCID:
PMC4918011
AbstractArticlePDF–2.4M
13.
Horizontal gene transfer of acetyltransferases, invertases and chorismate mutases from different bacteria to diverse recipients
Jason B. Noon, Thomas J. Baum
BMC Evol Biol. 2016; 16: 74. Published online 2016 Apr 12. doi: 10.1186/s12862-016-0651-y
PMCID:
PMC4828791
AbstractArticlePDF–2.8M
14.
Bacterial ecology of abattoir wastewater treated by an anaerobic digestor
Linda Jabari, Hana Gannoun, Eltaief Khelifi, Jean-Luc Cayol, Jean-Jacques Godon, Moktar Hamdi, Marie-Laure Fardeau
Braz J Microbiol. 2016 Jan-Mar; 47(1): 73–84. Published online 2016 Feb 17. doi: 10.1016/j.bjm.2015.11.029
PMCID:
PMC4822766
AbstractArticlePDF–1.3M
15.
Metagenomic analysis of microbial consortia enriched from compost: new insights into the role of Actinobacteria in lignocellulose decomposition
Cheng Wang, Da Dong, Haoshu Wang, Karin Müller, Yong Qin, Hailong Wang, Weixiang Wu
Biotechnol Biofuels. 2016; 9: 22. Published online 2016 Jan 29. doi: 10.1186/s13068-016-0440-2
PMCID:
PMC4731972
AbstractArticlePDF–3.9M
16.
Novel α-L-Fucosidases from a Soil Metagenome for Production of Fucosylated Human Milk Oligosaccharides
Mateusz Lezyk, Carsten Jers, Louise Kjaerulff, Charlotte H. Gotfredsen, Maria D. Mikkelsen, Jørn D. Mikkelsen
PLoS One. 2016; 11(1): e0147438. Published online 2016 Jan 22. doi: 10.1371/journal.pone.0147438
PMCID:
PMC4723247
AbstractArticlePDF–879K
17.
Evidence for a Functional O-Linked N-Acetylglucosamine (O-GlcNAc) System in the Thermophilic Bacterium Thermobaculum terrenum
Adam Ostrowski, Mehmet Gundogdu, Andrew T. Ferenbach, Andrey A. Lebedev, Daan M. F. van Aalten
J Biol Chem. 2015 Dec 18; 290(51): 30291–30305. Published online 2015 Oct 21. doi: 10.1074/jbc.M115.689596
PMCID:
PMC4683255
AbstractArticlePDF–5.2M
18.
CVTree3 Web Server for Whole-genome-based and Alignment-free Prokaryotic Phylogeny and Taxonomy
Guanghong Zuo, Bailin Hao
Genomics Proteomics Bioinformatics. 2015 Oct; 13(5): 321–331. Published online 2015 Nov 10. doi: 10.1016/j.gpb.2015.08.004
PMCID:
PMC4678791
AbstractArticlePDF–2.8M
19.
Molecular insights into DNA interference by CRISPR-associated nuclease-helicase Cas3
Bei Gong, Minsang Shin, Jiali Sun, Che-Hun Jung, Edward L. Bolt, John van der Oost, Jeong-Sun Kim
Proc Natl Acad Sci U S A. 2014 Nov 18; 111(46): 16359–16364. Published online 2014 Nov 3. doi: 10.1073/pnas.1410806111
PMCID:
PMC4246338
AbstractArticlePDF–1.2M
20.
Efficient PCR-Based Amplification of Diverse Alcohol Dehydrogenase Genes from Metagenomes for Improving Biocatalysis: Screening of Gene-Specific Amplicons from Metagenomes
Nobuya Itoh, Satomi Kariya, Junji Kurokawa
Appl Environ Microbiol. 2014 Oct; 80(20): 6280–6289. doi: 10.1128/AEM.01529-14
Correction in:
Appl Environ Microbiol. 2016 Mar 15; 82(6): 1976.
PMCID:
PMC4178635
AbstractArticlePDF–2.0M

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