PMC Links for Nucleotide (Select 316939066) - PMC

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Items: 13

Select item 31331401.

Complete Genome Sequence of the Cellulolytic Thermophile Clostridium thermocellum DSM1313

Lawrence Feinberg, Justine Foden, Trisha Barrett, Karen Walston Davenport, David Bruce, Chris Detter, Roxanne Tapia, Cliff Han, Alla Lapidus, Susan Lucas, Jan-Fang Cheng, Samuel Pitluck, Tanja Woyke, Natalia Ivanova, Natalia Mikhailova, Miriam Land, Loren Hauser, D. Aaron Argyros, Lynne Goodwin, David Hogsett, Nicky Caiazza

J Bacteriol. 2011 Jun; 193(11): 2906–2907. doi: 10.1128/JB.00322-11

PMCID:: PMC3133140

Abstract Article PDF–37K

Select item 69262932.

Development of both type I–B and type II CRISPR/Cas genome editing systems in the cellulolytic bacterium Clostridium thermocellum

Julie E. Walker, Anthony A. Lanahan, Tianyong Zheng, Camilo Toruno, Lee R. Lynd, Jeffrey C. Cameron, Daniel G. Olson, Carrie A. Eckert

Metab Eng Commun. 2020 Jun; 10: e00116. Published online 2019 Nov 28. doi: 10.1016/j.mec.2019.e00116

PMCID:: PMC6926293

Abstract Article PDF–1.4M

Select item 66520073.

Metabolic engineering of Clostridium thermocellum for n-butanol production from cellulose

Liang Tian, Peter M. Conway, Nicholas D. Cervenka, Jingxuan Cui, Marybeth Maloney, Daniel G. Olson, Lee R. Lynd

Biotechnol Biofuels. 2019; 12: 186. Published online 2019 Jul 23. doi: 10.1186/s13068-019-1524-6

PMCID:: PMC6652007

Abstract Article PDF–2.4M

Select item 63708044.

A mutation in the AdhE alcohol dehydrogenase of Clostridium thermocellum increases tolerance to several primary alcohols, including isobutanol, n-butanol and ethanol

Liang Tian, Nicholas D. Cervenka, Aidan M. Low, Daniel G. Olson, Lee R. Lynd

Sci Rep. 2019; 9: 1736. Published online 2019 Feb 11. doi: 10.1038/s41598-018-37979-5

PMCID:: PMC6370804

Abstract Article PDF–1.8M

Select item 61258875.

Expressing the Thermoanaerobacterium saccharolyticum pforA in engineered Clostridium thermocellum improves ethanol production

Shuen Hon, Evert K. Holwerda, Robert S. Worthen, Marybeth I. Maloney, Liang Tian, Jingxuan Cui, Paul P. Lin, Lee R. Lynd, Daniel G. Olson

Biotechnol Biofuels. 2018; 11: 242. Published online 2018 Sep 6. doi: 10.1186/s13068-018-1245-2

PMCID:: PMC6125887

Abstract Article PDF–2.5M

Select item 56788266.

Development of a plasmid-based expression system in Clostridium thermocellum and its use to screen heterologous expression of bifunctional alcohol dehydrogenases (adhEs)

Shuen Hon, Anthony A. Lanahan, Liang Tian, Richard J. Giannone, Robert L. Hettich, Daniel G. Olson, Lee R. Lynd

Metab Eng Commun. 2016 Dec; 3: 120–129. Published online 2016 Apr 22. doi: 10.1016/j.meteno.2016.04.001

PMCID:: PMC5678826

Abstract Article PDF–1.4M

Select item 53225367.

Pentose sugars inhibit metabolism and increase expression of an AgrD-type cyclic pentapeptide in Clostridium thermocellum

Tobin J. Verbeke, Richard J. Giannone, Dawn M. Klingeman, Nancy L. Engle, Thomas Rydzak, Adam M. Guss, Timothy J. Tschaplinski, Steven D. Brown, Robert L. Hettich, James G. Elkins

Sci Rep. 2017; 7: 43355. Published online 2017 Feb 23. doi: 10.1038/srep43355

Correction in:: Sci Rep. 2017; 7: 46875.

PMCID:: PMC5322536

Abstract Article PDF–1.0M

Select item 53114188.

LacI Transcriptional Regulatory Networks in Clostridium thermocellum DSM1313

Charlotte M. Wilson, Dawn M. Klingeman, Caleb Schlachter, Mustafa H. Syed, Chia-wei Wu, Adam M. Guss, Steven D. Brown

Appl Environ Microbiol. 2017 Mar 1; 83(5): e02751-16. Prepublished online 2016 Dec 21. Published online 2017 Feb 15. doi: 10.1128/AEM.02751-16

PMCID:: PMC5311418

Abstract Article PDF–1.7M

Select item 52098969.

Improved growth rate in Clostridium thermocellum hydrogenase mutant via perturbed sulfur metabolism

Ranjita Biswas, Charlotte M. Wilson, Richard J. Giannone, Dawn M. Klingeman, Thomas Rydzak, Manesh B. Shah, Robert L. Hettich, Steven D. Brown, Adam M. Guss

Biotechnol Biofuels. 2017; 10: 6. Published online 2017 Jan 3. doi: 10.1186/s13068-016-0684-x

PMCID:: PMC5209896

Abstract Article PDF–1.5M

Select item 508645810.

Characterisation of Drosophila CMP-sialic acid synthetase activity reveals unusual enzymatic properties

Ilya B. Mertsalov, Boris N. Novikov, Hilary Scott, Lawrence Dangott, Vladislav M. Panin

Biochem J. Author manuscript; available in PMC 2016 Oct 31.

Published in final edited form as: Biochem J. 2016 Jul 1; 473(13): 1905–1916. Published online 2016 Apr 25. doi: 10.1042/BCJ20160347

PMCID:: PMC5086458

Abstract Article PDF–1.3M

Select item 501205711.

Exploring complex cellular phenotypes and model-guided strain design with a novel genome-scale metabolic model of Clostridium thermocellum DSM 1313 implementing an adjustable cellulosome

R. Adam Thompson, Sanjeev Dahal, Sergio Garcia, Intawat Nookaew, Cong T. Trinh

Biotechnol Biofuels. 2016; 9(1): 194. Published online 2016 Sep 6. doi: 10.1186/s13068-016-0607-x

PMCID:: PMC5012057

Abstract Article PDF–2.0M

Select item 451883812.

Cofactor Specificity of the Bifunctional Alcohol and Aldehyde Dehydrogenase (AdhE) in Wild-Type and Mutant Clostridium thermocellum and Thermoanaerobacteriumsaccharolyticum

Tianyong Zheng, Daniel G. Olson, Liang Tian, Yannick J. Bomble, Michael E. Himmel, Jonathan Lo, Shuen Hon, A. Joe Shaw, Johannes P. van Dijken, Lee R. Lynd

J Bacteriol. 2015 Aug; 197(15): 2610–2619. Prepublished online 2015 May 26. Published online 2015 Jul 6. doi: 10.1128/JB.00232-15